DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD6 and gst-42

DIOPT Version :9

Sequence 1:NP_524915.1 Gene:GstD6 / 48339 FlyBaseID:FBgn0010042 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_509962.1 Gene:gst-42 / 183911 WormBaseID:WBGene00001790 Length:214 Species:Caenorhabditis elegans


Alignment Length:191 Identity:49/191 - (25%)
Similarity:82/191 - (42%) Gaps:48/191 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VMMTAKAVGVEFNSIQVNTFVGEQLEPWFVKINPQHTIPTLVDNLFVIWETRAIVVYLVEQYGKD 79
            :.:..|.|..|:.::.:   :.|:.:....:|||...:||.|.:..||.|:.||:.||.|.: .|
 Worm    22 IALALKNVDYEYKTVDL---LSEEAKSKLKEINPAAKVPTFVVDGQVITESLAIIEYLEETH-PD 82

  Fly    80 DSLYPKDPQKQA-----------------------LINQRLYFDMGTLYDG-IAKYFFPLLRTGK 120
            ..|.||||.|:|                       |:|::   :.|  :.| .||.|.       
 Worm    83 VPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKK---EAG--FGGQFAKQFV------- 135

  Fly   121 PGTQENLEKLNAAFDLLNNFLDGQDYVAGNQLSVADIVILATVSTTEMVDFDLKKFPNVDR 181
                  :|.|.|...||... .|: |..|:.:::||:.|...:.:....:.||..:|.|:|
 Worm   136 ------VEGLTALEILLKQH-SGK-YAVGDDVTIADLSIPPLIYSANRFNLDLSPYPTVNR 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD6NP_524915.1 GST_N_Delta_Epsilon 1..74 CDD:239343 17/58 (29%)
PLN02395 11..208 CDD:166036 49/191 (26%)
GST_C_Delta_Epsilon 88..204 CDD:198287 25/118 (21%)
gst-42NP_509962.1 GST_N_Zeta 6..77 CDD:239340 16/57 (28%)
maiA 7..211 CDD:273527 49/191 (26%)
GST_C_Zeta 90..207 CDD:198300 26/119 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.