DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD6 and Gdap1

DIOPT Version :10

Sequence 1:NP_524915.1 Gene:GstD6 / 48339 FlyBaseID:FBgn0010042 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_034397.1 Gene:Gdap1 / 14545 MGIID:1338002 Length:358 Species:Mus musculus


Alignment Length:263 Identity:48/263 - (18%)
Similarity:86/263 - (32%) Gaps:82/263 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LYNMSGSPSTRAVMMTAKAVGVEFNSIQVNTFVGEQLEPWFVKINPQHTIPTLVDNLFVIWETRA 67
            ||:.:.|.|::.|.:......::.....|:..:.|..||||:::|....:|.||....:|.|...
Mouse    28 LYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSAGEVPVLVHGENIICEATQ 92

  Fly    68 IVVYLVEQY----------GKDDSLYPK----------------------------DPQKQALIN 94
            |:.||.:.:          .:....||:                            |....|...
Mouse    93 IIDYLE
QTFLDERTPRLMPDEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYAT 157

  Fly    95 QRLYFDMGTLYDGIAKYFFPLLRTGKPGTQE-----------------NLEKLNAAFDLLNNFLD 142
            .|:...:|.....:.|     |....|..||                 |::.|....|.|...||
Mouse   158 TRIRSQIGNTESELKK-----LAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLD 217

  Fly   143 -----------------GQDYVAGNQLSVADIVILATVSTTEMVDFDLK-----KFPNVDRWYKN 185
                             .|.::.|...::||:.:..|:...:.:.|..:     |.||::.:|:.
Mouse   218 QVETELQRRNEETPEEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLETYYER 282

  Fly   186 AQK 188
            ..|
Mouse   283 VLK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD6NP_524915.1 GST_N_Delta_Epsilon 1..74 CDD:239343 20/70 (29%)
GST_C_Delta_Epsilon 88..204 CDD:198287 25/140 (18%)
Gdap1NP_034397.1 GST_N_GDAP1 26..98 CDD:239350 19/69 (28%)
GST_C_GDAP1 179..289 CDD:198336 20/107 (19%)
Required for mitochondrial localization. /evidence=ECO:0000250 320..358
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.