DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD5 and Clic5

DIOPT Version :9

Sequence 1:NP_524914.3 Gene:GstD5 / 48338 FlyBaseID:FBgn0010041 Length:216 Species:Drosophila melanogaster
Sequence 2:XP_006524198.1 Gene:Clic5 / 224796 MGIID:1917912 Length:485 Species:Mus musculus


Alignment Length:193 Identity:41/193 - (21%)
Similarity:74/193 - (38%) Gaps:48/193 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VIMVAKALGVKLNMKLLNTLEKDQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKD 79
            :.|:....||..|   :.|::..:...:...|.|....|.|..||....:...|..:|      :
Mouse   272 LFMILWLKGVVFN---VTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFL------E 327

  Fly    80 DTLFPKDPKKQALVNQRLYFDMGTL-YDSFAKYYYPLFHTGKP-------GSDEDFKKIESSFEY 136
            :||.|:...|.|..::    :..|. .|.|:|:...:.:|.:.       |..:..:|::   :|
Mouse   328 ETLTPEKYPKLAAKHR----ESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLD---DY 385

  Fly   137 LNIFL--------------EGQNYVAGDHLTVADIAILSTVSTFEIFDFDLNKYPNVARWYAN 185
            ||..|              ..:.::.||.||:||..:|..:...:|          ||:.|.|
Mouse   386 LNSPLPEEIDTNTHGDEKGSQRKFLDGDELTLADCNLLPKLHVVKI----------VAKKYRN 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD5NP_524914.3 GstA 1..184 CDD:223698 39/190 (21%)
GST_N_Delta_Epsilon 1..74 CDD:239343 13/58 (22%)
GST_C_Delta_Epsilon 88..204 CDD:198287 25/120 (21%)
Clic5XP_006524198.1 O-ClC 248..483 CDD:129941 41/193 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844769
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.