DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD5 and Vars1

DIOPT Version :10

Sequence 1:NP_524914.3 Gene:GstD5 / 48338 FlyBaseID:FBgn0010041 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_035820.3 Gene:Vars1 / 22321 MGIID:90675 Length:1263 Species:Mus musculus


Alignment Length:175 Identity:41/175 - (23%)
Similarity:64/175 - (36%) Gaps:32/175 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PQHTIPTLVD--NGFSIWESRAIAVYLVEKYGKDDTLFPKDPKKQALVNQRLYFDMGTLYDSFAK 110
            |...:|.|..  .|..:|.:.|:| .|:...|...   |...:...||.|.:.:....|..:...
Mouse    53 PPPRLPALEQGPGGLWVWGAPAVA-QLLWPAGLGG---PGGSRAAVLVQQWVSYADTELIPAACG 113

  Fly   111 YYYPLFHTGKPGSDED--FKKIESSFEYLNIFLEGQNYVAGDHLTVADI-AILSTVSTFE-IFDF 171
            ...|......||.|..  ...:..:...|..:|....|:|||..|:||: |:.:.:..|. :.|.
Mouse   114 ATLPALGLRGPGQDPQAALGALGKALNPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDP 178

  Fly   172 DLNK-YPNVARW-------------------YANAKKVT--PGWE 194
            ...: :.||.||                   |:.|:.||  ||.|
Mouse   179 SARRIWGNVTRWFNTCVRQPEFRAVLGEVALYSGARSVTQQPGSE 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD5NP_524914.3 GST_N_Delta_Epsilon 1..74 CDD:239343 8/27 (30%)
GST_C_Delta_Epsilon 88..204 CDD:198287 31/133 (23%)
Vars1NP_035820.3 GST_C_family 92..213 CDD:470672 25/120 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..294 3/6 (50%)
PTZ00419 281..1263 CDD:240411
'HIGH' region 343..353
'KMSKS' region 861..865
Blue background indicates that the domain is not in the aligned region.

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