DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD4 and EEF1E1

DIOPT Version :9

Sequence 1:NP_524913.1 Gene:GstD4 / 48337 FlyBaseID:FBgn0010040 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_004271.1 Gene:EEF1E1 / 9521 HGNCID:3212 Length:174 Species:Homo sapiens


Alignment Length:191 Identity:43/191 - (22%)
Similarity:87/191 - (45%) Gaps:29/191 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VAKALGLELNKKQLRITEGEHLKPEFLKLNPQHTIPTL-VDNGFAIWESRAIAVYLVEKYGKDDS 81
            :|.|..|.|.:|.|.:::|.....:     .:..||.| .:||.::.....||.:||::..| :.
Human     1 MAAAAELSLLEKSLGLSKGNKYSAQ-----GERQIPVLQTNNGPSLTGLTTIAAHLVKQANK-EY 59

  Fly    82 LFPNDPQKRALINQRLYFDMGTLHDSFMKYYYPFIRTGQLGNAENYKKVEAAFEFLDIFLEGQDY 146
            |..:..:::|::.|.|.:                 |..|:....:...:....:.|:.:||.:.|
Human    60 LLGSTAEEKAIVQQWLEY-----------------RVTQVDGHSSKNDIHTLLKDLNSYLEDKVY 107

  Fly   147 VAGSQLTVADIAILSSVSTFEVVEFDI---SKYPNVARWYANAKKITPGWDENWKGLLQMK 204
            :.|...|:|||.:...:..| :|:..:   .||.||:||:.:.:.. ||..::...::.:|
Human   108 LTGYNFTLADILLYYGLHRF-IVDLTVQEKEKYLNVSRWFCHIQHY-PGIRQHLSSVVFIK 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD4NP_524913.1 PRK10542 1..184 CDD:182533 40/169 (24%)
GST_N_Delta_Epsilon 1..74 CDD:239343 15/56 (27%)
GST_C_Delta_Epsilon 88..204 CDD:198287 24/118 (20%)
EEF1E1NP_004271.1 N-terminal 2..56 16/58 (28%)
Linker 57..63 2/6 (33%)
C-terminal 64..152 22/105 (21%)
GST_C_AIMP3 65..165 CDD:198338 24/118 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.