DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD4 and GSTU14

DIOPT Version :9

Sequence 1:NP_524913.1 Gene:GstD4 / 48337 FlyBaseID:FBgn0010040 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_174034.1 Gene:GSTU14 / 839603 AraportID:AT1G27140 Length:243 Species:Arabidopsis thaliana


Alignment Length:185 Identity:44/185 - (23%)
Similarity:63/185 - (34%) Gaps:44/185 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LKLNPQH-TIPTLVDNGFAIWESRAIAVYLVEKYGKDDSLFPNDPQKRA-------LINQRLYFD 100
            ||.||.| ..|.|:....||.||..|..||.|.:..|.|:.|::...||       .|:.:.:..
plant    50 LKSNPIHKKTPVLIHGDLAICESLNIVQYLDEAWPSDPSILPSNAYDRASARFWAQYIDDKCFEA 114

  Fly   101 MGTLHDSFMKYYYPFIRTGQLGNAENYKKVEAAFEFLDIFLE-------GQDYVAGSQLTVADIA 158
            ...|             ||...:.|.........|.|.|..|       |..:..|..:...|||
plant   115 ANAL-------------TGANNDEERIAATGKLTECLAILEETFQKSSKGLGFFGGETIGYLDIA 166

  Fly   159 ILSSVSTFEVVE-FDISKYPNVARWYANAKKITPGWDENWKGLLQMKTMYEAQKA 212
            ..:.:....|:| |...|:..               :|...||:|....:.|.:|
plant   167 CAALLGPISVIEMFSADKFVR---------------EETTPGLIQWAVRFRAHEA 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD4NP_524913.1 PRK10542 1..184 CDD:182533 38/155 (25%)
GST_N_Delta_Epsilon 1..74 CDD:239343 14/30 (47%)
GST_C_Delta_Epsilon 88..204 CDD:198287 24/130 (18%)
GSTU14NP_174034.1 GST_N_Tau 7..83 CDD:239356 15/32 (47%)
GST_C_Tau 94..224 CDD:198294 26/141 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.