DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD4 and clic2

DIOPT Version :9

Sequence 1:NP_524913.1 Gene:GstD4 / 48337 FlyBaseID:FBgn0010040 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001002561.2 Gene:clic2 / 436834 ZFINID:ZDB-GENE-040718-299 Length:239 Species:Danio rerio


Alignment Length:169 Identity:46/169 - (27%)
Similarity:74/169 - (43%) Gaps:34/169 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KPEFLK-LNPQHTIPTLVDNGFAIWESRAIAVYLVEKYGKDDSLFPNDPQKRALI-NQRLYFDMG 102
            ||:.|| |.|....|.|:.||....:...|..:|      :.:|.|  |:...|. ..:..||:|
Zfish    56 KPDELKDLAPGTNPPFLLYNGTLKTDFIKIEEFL------ETTLAP--PRYPHLSPRYKESFDVG 112

  Fly   103 TLHDSFMKYYYPFIRTGQLGNAENYKKVEAAFEFLDIFLEG--QD------------YVAGSQLT 153
            .  |.|.| :..||:... .||.:.|.:...|:.||.:|..  ||            ::.|::||
Zfish   113 A--DIFAK-FSAFIKNSP-NNAFHEKALLREFKRLDDYLNTPLQDELDQNISVSKRKFLDGNRLT 173

  Fly   154 VADIAILSSVSTFEVV-----EFDI-SKYPNVARWYANA 186
            :||..:|..:...:|.     .||| :::..|.|:..:|
Zfish   174 LADCNLLPKLHVIKVAARKYCNFDIPTQFTGVWRYLQSA 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD4NP_524913.1 PRK10542 1..184 CDD:182533 45/165 (27%)
GST_N_Delta_Epsilon 1..74 CDD:239343 12/34 (35%)
GST_C_Delta_Epsilon 88..204 CDD:198287 31/120 (26%)
clic2NP_001002561.2 O-ClC 11..238 CDD:129941 46/169 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589559
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.