back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstD4 and Gstt2

DIOPT Version :9

Sequence 1:	NP_524913.1	Gene:	GstD4 / 48337	FlyBaseID:	FBgn0010040	Length:	215	Species:	Drosophila melanogaster
Sequence 2:	NP_036928.1	Gene:	Gstt2 / 29487	RGDID:	69362	Length:	244	Species:	Rattus norvegicus

Alignment Length:	171	Identity:	47/171 - (27%)
Similarity:	81/171 - (47%)	Gaps:	8/171 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MDFYYSPRSSGSRTIIMVAKALGLELNKKQLRITEGEHLKPEFLKLNPQHTIPTLVDNGFAIWES 65
            ::.|....|..||.:.:.||..|:....:.:.:.:|:||..:|.::|....:|.|.|..|.:.||
  Rat     3 LELYLDLLSQPSRAVYIFAKKNGIPFQLRTVDLLKGQHLSEQFSQVNCLKKVPVLKDGSFVLTES 67

  Fly    66 RAIAVYLVEKYGKDDSLFPNDPQKRALINQRLYFDMGTLHDSFMKYYYPFIRTGQLGNAENYKKV 130
            .||.:||..||...|..:|.|.|.||.:::.|.:....:..:|....:..:....:|.....:||
  Rat    68 TAILIYLSSKYQVADHWYPADLQARAQVHEYLGWHADNIRGTFGVLLWTKVLGPLIGVQVPEEKV 132

  Fly   131 E--------AAFEFLDIFLEGQDYVAGSQLTVADIAILSSV 163
            |        |.....|.||..:.::||.|:|:||:..|..:
  Rat   133 ERNRNSMVLALQRLEDKFLRDRAFIAGQQVTLADLMSLEEL 173

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.