DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD4 and gst-39

DIOPT Version :9

Sequence 1:NP_524913.1 Gene:GstD4 / 48337 FlyBaseID:FBgn0010040 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_497119.1 Gene:gst-39 / 190226 WormBaseID:WBGene00001787 Length:209 Species:Caenorhabditis elegans


Alignment Length:161 Identity:42/161 - (26%)
Similarity:71/161 - (44%) Gaps:20/161 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RITEGEHLKPEFLKLNPQHTIPTLVDNGFAIWESRAIAVYLVEKYGKDDSLFPNDPQKRALINQR 96
            |:|.|:....:.....|...:|.|..:||.|.:|.||..||..|:|.............|:::|.
 Worm    33 RLTHGDGSWEKIKDKTPFGQVPVLSVDGFDIPQSAAIIRYLANKFGYAGKTPEEQAWADAIVDQF 97

  Fly    97 LYFDMGTLHDSFMKYYYPFIRTGQLGNAENYKKV---------EAAFEFLDIFLE--GQDYVAGS 150
            ..| ||......|..     |:|:  .||...|:         ::.|:.|:..||  ...::.|.
 Worm    98 KDF-MGAFRQLIMAQ-----RSGK--PAEEIAKISSEVAIPARDSYFKILNGLLEKSKSGFLVGD 154

  Fly   151 QLTVADIAILSSVSTFEVVE-FDISKYPNVA 180
            .||.|||.::.:::|.|..: |..|::|.::
 Worm   155 GLTFADIVVVENLTTLEKNQFFTASEHPKLS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD4NP_524913.1 PRK10542 1..184 CDD:182533 42/161 (26%)
GST_N_Delta_Epsilon 1..74 CDD:239343 14/41 (34%)
GST_C_Delta_Epsilon 88..204 CDD:198287 26/105 (25%)
gst-39NP_497119.1 GST_N_Sigma_like 4..74 CDD:239337 13/40 (33%)
PTZ00057 6..209 CDD:173353 42/161 (26%)
GST_C_Sigma_like 85..191 CDD:198301 26/109 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X30
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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