DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstD3 and GSTF12

DIOPT Version :9

Sequence 1:	NP_788656.1	Gene:	GstD3 / 48336	FlyBaseID:	FBgn0010039	Length:	199	Species:	Drosophila melanogaster
Sequence 2:	NP_197224.1	Gene:	GSTF12 / 831586	AraportID:	AT5G17220	Length:	214	Species:	Arabidopsis thaliana

Alignment Length:	194	Identity:	47/194 - (24%)
Similarity:	85/194 - (43%)	Gaps:	32/194 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 GLEFNKKIINTLKGEQMNPDFIKINPQHSIPTLVDNGFTIWESRAILVYLVEKYGKDDA-LYPKD 70
            |:||....|:....||..|:.:...|...:|.:.|..|.::|||||..|...|:..... |..|.
plant    25 GIEFEIIHIDLDTFEQKKPEHLLRQPFGQVPAIEDGDFKLFESRAIARYYATKFADQGTNLLGKS 89

  Fly    71 IQKQAVINQ----RLYFDMALMYPTLANYYYKAFTTGQFGSE------EDYK-KVQETFDFLNTF 124
            ::.:|:::|    ..|:...|..|.:.|...|.    :.|.:      ||.| |:....|..|..
plant    90 LEHRAIVDQWADVETYYFNVLAQPLVINLIIKP----RLGEKCDVVLVEDLKVKLGVVLDIYNNR 150

  Fly   125 LEGQDYVAGDQYTVADIAILANVSNFDVVGF-----DISKYPNVA----RWYDHVKKITPGWEE 179
            |....::||:::|:||:      ::...:|:     ||::.....    ||::.:.. .|.|::
plant   151 LSSNRFLAGEEFTMADL------THMPAMGYLMSITDINQMVKARGSFNRWWEEISD-RPSWKK 207

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
GstD3	NP_788656.1	GST_N_Delta_Epsilon	<1..58	CDD:239343	17/50 (34%)
		GstA	6..173	CDD:223698	45/186 (24%)
		GST_C_Delta_Epsilon	72..188	CDD:198287	27/128 (21%)
GSTF12	NP_197224.1	PLN02473	1..214	CDD:166114	47/194 (24%)
		GST_N_Phi	2..77	CDD:239351	17/51 (33%)
		GST_C_Phi	91..209	CDD:198296	27/128 (21%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	54	1.000	Domainoid score	I4138
eggNOG	1	0.900	-	-		E1_COG0625
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	77	1.000	Inparanoid score	I2398
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000035
OrthoInspector	1	1.000	-	-		mtm975
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X30
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	6.860