DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD3 and Gsto2

DIOPT Version :9

Sequence 1:NP_788656.1 Gene:GstD3 / 48336 FlyBaseID:FBgn0010039 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001012071.1 Gene:Gsto2 / 309465 RGDID:1310764 Length:248 Species:Rattus norvegicus


Alignment Length:200 Identity:40/200 - (20%)
Similarity:73/200 - (36%) Gaps:45/200 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LKGEQMNPDFIKIN------------PQHSIPTLVDNGF-TIWESRAILVYLVEKYGKDDA---- 65
            ||.:.:..:.|.||            |...:|.|.::.. .|:||.....||      ||.    
  Rat    42 LKAKSIRHEIININLKNKPDWYYTKHPFGQVPVLENSQCQLIYESVIACEYL------DDVFPGR 100

  Fly    66 -LYPKDIQKQAVINQRLYFDMALMYPTLANYYYKAFTTG------QFGSEEDYKKVQETFDFLNT 123
             |:|.|..::|  .|::..::....|.|:.....|...|      :....::...::|..::.||
  Rat   101 KLFPYDPYERA--RQKMLLELFCKVPQLSKECLVALRCGRDCTDLKVALRQELCNLEEILEYQNT 163

  Fly   124 FLEGQDYVAGDQYTVADIAILANVSNFDVVGFD--ISKYPNVARWYDHVKKITPGWEENWAGALD 186
                 .:..||..::.|..:.......||.|..  ::..|.:..|...:|      ::....||.
  Rat   164 -----TFFGGDSISMIDYLVWPWFERLDVYGLADCVNHTPMLRLWISSMK------QDPAVCALH 217

  Fly   187 VKKRI 191
            :.|.|
  Rat   218 IDKNI 222

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstD3NP_788656.1 GST_N_Delta_Epsilon <1..58 CDD:239343 13/52 (25%)
GstA 6..173 CDD:223698 36/180 (20%)
GST_C_Delta_Epsilon 72..188 CDD:198287 20/123 (16%)
Gsto2NP_001012071.1 GST_N_Omega 7..94 CDD:239353 13/57 (23%)