DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD3 and Eef1e1

DIOPT Version :9

Sequence 1:NP_788656.1 Gene:GstD3 / 48336 FlyBaseID:FBgn0010039 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001099576.1 Gene:Eef1e1 / 291057 RGDID:1311056 Length:174 Species:Rattus norvegicus


Alignment Length:194 Identity:47/194 - (24%)
Similarity:88/194 - (45%) Gaps:36/194 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVGKALGLEFNKKIINTLKGEQMNPDFIKINPQHSIPTL-VDNGFTIWESRAILVYLVEKYGKDD 64
            ::.|:|||:...|.  :.:||:            .:|.| .:||.::.....|..:||::..|:.
  Rat     9 LLEKSLGLKPGNKY--SAQGER------------QVPVLQTNNGPSLMGLSTIATHLVKEANKEH 59

  Fly    65 ALYPKDIQKQAVINQRLYFDMALMYPTLANYYYKAFTTGQFGSEEDYKKVQETFDFLNTFLEGQD 129
             |.....:::|::.|.|.|              :........|:||   .|.....||::||.:.
  Rat    60 -LLGSTAEEKALVQQWLEF--------------RITRVDGHSSKED---TQTLLKDLNSYLEDKV 106

  Fly   130 YVAGDQYTVADIAILANVSNF--DVVGFDISKYPNVARWYDHVKKITPGWEENWAGALDVKKRI 191
            |:||...|:|||.:...:..|  |:...:..||.||:||:.|::.. |...::.:..:.:|.|:
  Rat   107 YLAGHNTTLADILLYYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHY-PDIRQHLSSVVFIKNRL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD3NP_788656.1 GST_N_Delta_Epsilon <1..58 CDD:239343 13/57 (23%)
GstA 6..173 CDD:223698 43/169 (25%)
GST_C_Delta_Epsilon 72..188 CDD:198287 29/117 (25%)
Eef1e1NP_001099576.1 GST_C_AIMP3 65..165 CDD:198338 29/117 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.