DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD3 and Vars

DIOPT Version :9

Sequence 1:NP_788656.1 Gene:GstD3 / 48336 FlyBaseID:FBgn0010039 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_035820.3 Gene:Vars / 22321 MGIID:90675 Length:1263 Species:Mus musculus


Alignment Length:154 Identity:38/154 - (24%)
Similarity:62/154 - (40%) Gaps:31/154 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PQHSIPTLVD--NGFTIWESRAILVYLVEKYGKDDALYPKDI-----QKQAVINQR--LYFDMAL 87
            |...:|.|..  .|..:|.:.|:.          ..|:|..:     .:.||:.|:  .|.|..|
Mouse    53 PPPRLPALEQGPGGLWVWGAPAVA----------QLLWPAGLGGPGGSRAAVLVQQWVSYADTEL 107

  Fly    88 MYPTLANYYYKAFTTGQFGSEEDYK----KVQETFDFLNTFLEGQDYVAGDQYTVADI-AILANV 147
            : |........|.  |..|..:|.:    .:.:..:.|..:|....|:|||..|:||: |:.|.:
Mouse   108 I-PAACGATLPAL--GLRGPGQDPQAALGALGKALNPLEDWLRLHTYLAGDAPTLADLAAVTALL 169

  Fly   148 SNFDVVGFDISK---YPNVARWYD 168
            ..|..| .|.|.   :.||.||::
Mouse   170 LPFRYV-LDPSARRIWGNVTRWFN 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD3NP_788656.1 GST_N_Delta_Epsilon <1..58 CDD:239343 6/27 (22%)
GstA 6..173 CDD:223698 38/154 (25%)
GST_C_Delta_Epsilon 72..188 CDD:198287 30/107 (28%)
VarsNP_035820.3 GST_C_family 92..213 CDD:383119 30/105 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..294
PTZ00419 281..1263 CDD:240411
'HIGH' region 343..353
'KMSKS' region 861..865
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.