DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD3 and vars1

DIOPT Version :10

Sequence 1:NP_788656.1 Gene:GstD3 / 48336 FlyBaseID:FBgn0010039 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001298275.1 Gene:vars1 / 114427 ZFINID:ZDB-GENE-010601-1 Length:1271 Species:Danio rerio


Alignment Length:155 Identity:34/155 - (21%)
Similarity:62/155 - (40%) Gaps:37/155 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SIPTLV--DNGFTIWESRAILVYLVEKYGKDDALYPKDIQKQAVINQRLYF--------DMALMY 89
            |.|.||  ..|.|:....:.:.:.:...||...   .|.::::.:.|.|.|        ..|:.:
Zfish    43 SRPALVLAGAGGTVLSGTSAVSWYLAATGKRAG---SDKKQESQVWQWLSFAENELTPVACAVAF 104

  Fly    90 PTLANYYYKAFTTGQFGSEEDYKKVQET--------FDFLNTFLEGQDYVAGDQYTVADIAI-LA 145
            |.|          |..|.:   ||:|::        ...|:..|..:.::.|:..|:||.|: :|
Zfish   105 PLL----------GIMGVD---KKLQQSSRAELLRVLKALDGTLALRTFLVGESVTLADAAVAMA 156

  Fly   146 NVSNFD--VVGFDISKYPNVARWYD 168
            .:..|.  :...|.....||.||::
Zfish   157 ALLPFKYALEPADRKSLVNVTRWFN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD3NP_788656.1 GST_N_Delta_Epsilon <1..58 CDD:239343 6/24 (25%)
GST_C_Delta_Epsilon 72..188 CDD:198287 25/116 (22%)
vars1NP_001298275.1 GST_C_ValRS_N 80..202 CDD:198327 25/115 (22%)
PTZ00419 291..1270 CDD:240411
Blue background indicates that the domain is not in the aligned region.

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