DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD2 and mars1

DIOPT Version :9

Sequence 1:NP_524912.1 Gene:GstD2 / 48335 FlyBaseID:FBgn0010038 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_956370.1 Gene:mars1 / 338183 ZFINID:ZDB-GENE-030219-83 Length:922 Species:Danio rerio


Alignment Length:228 Identity:45/228 - (19%)
Similarity:84/228 - (36%) Gaps:54/228 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDFYYMPGGGGCRTVIMVAKALGLELNKKLLNTMEGEQLKPEFVKLNPQHTIPTL----VDNGFS 61
            |..:...|...|..|:...:..|:....:|:...|         |:.|..|.|.|    :.:|..
Zfish     1 MKLFIGEGNPHCLKVLAALELSGVRCETQLVKHEE---------KVVPYLTHPVLPILQLPSGQH 56

  Fly    62 IWESRAIAVYLVEKYGKDDYLLPNDPKKRAVINQRLYFDMGTLYESFAKYYYPLFRTGKPGSDED 126
            ::...:|..||.:..|:         |.....||.|.::...|..:..:....:...|       
Zfish    57 LFSPNSICQYLFDVSGQ---------KATDATNQWLEWEATNLQPAVLQSLQLVALQG------- 105

  Fly   127 LKRIETA------FGFLDTFLEGQE--YVAGDQLTVADIAI------LSTVSTFEVSEFD----- 172
             ||:|.|      ..:|:..|..::  ::..:.::|||:.:      |.:.|.||..:..     
Zfish   106 -KRVEAAAVMKEPLSWLEQSLSKRKTSFLTDEVVSVADVVLWAALYPLLSDSAFEPGDLQAVRGW 169

  Fly   173 FSKYSNVSRWYDNAKKVTPGWDENWEGLMAMKA 205
            |.:..:||.....|.:|..|     :|..|:|:
Zfish   170 FERVCSVSACQSAALRVLQG-----KGAEALKS 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD2NP_524912.1 GST_N_Delta_Epsilon 1..74 CDD:239343 16/76 (21%)
GST_C_Delta_Epsilon 88..204 CDD:198287 27/134 (20%)
mars1NP_956370.1 GstA 1..173 CDD:223698 37/197 (19%)
GST_N_family 1..67 CDD:238319 14/74 (19%)
GST_C_MetRS_N 75..176 CDD:198340 19/108 (18%)
PRK12268 261..820 CDD:237029
MetRS_core 263..631 CDD:173907
Anticodon_Ia_Met 640..769 CDD:153411
MetRS_RNA 866..910 CDD:238475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.