DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD2 and Gdap1

DIOPT Version :9

Sequence 1:NP_524912.1 Gene:GstD2 / 48335 FlyBaseID:FBgn0010038 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001101367.1 Gene:Gdap1 / 312890 RGDID:1309005 Length:358 Species:Rattus norvegicus


Alignment Length:259 Identity:46/259 - (17%)
Similarity:83/259 - (32%) Gaps:100/259 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VIMVAKALGLELNKKLLNTMEGEQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKD 79
            :::..|||..|.:...|...|..:  |.|::||....:|.|:.....|.|:..|..||     :.
  Rat    42 LVIAEKALKCEEHDVSLPLSEHNE--PWFMRLNSTGEVPVLIHGENIICEATQIIDYL-----EQ 99

  Fly    80 DYLLPNDPKKRAVINQRLYFDMGTLYESFAKYY---------------------------YPLFR 117
            .:|....|        ||..|.|::|....::|                           .|.:.
  Rat   100 TFLDERTP--------RLMPDEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYA 156

  Fly   118 T----GKPGSDE-DLKR--------------------------------------IETAFGFLDT 139
            |    |:.|:.| :||:                                      :|.....::|
  Rat   157 TTRIRGQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVET 221

  Fly   140 FLE----------GQEYVAGDQLTVADIAILSTVST-----FEVSEFDFSKYSNVSRWYDNAKK 188
            .|:          .|.::.|:..|:||:::..|:..     |....:...|..|:..:|:...|
  Rat   222 ELQRRNEETPDEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLESYYERVLK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD2NP_524912.1 GST_N_Delta_Epsilon 1..74 CDD:239343 17/58 (29%)
GST_C_Delta_Epsilon 88..204 CDD:198287 27/186 (15%)
Gdap1NP_001101367.1 GstA 26..292 CDD:223698 46/259 (18%)
GST_N_GDAP1 26..98 CDD:239350 17/62 (27%)
GST_C_GDAP1 179..289 CDD:198336 14/107 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348233
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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