DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttk and mod(mdg4)

DIOPT Version :10

Sequence 1:NP_733443.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster


Alignment Length:783 Identity:172/783 - (21%)
Similarity:273/783 - (34%) Gaps:241/783 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEK-H 69
            ::|.|.|||..:||.:.|.:.|......||:||.|||.:|||::|||.|||:|..:|...|.. |
  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69

  Fly    70 PIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDDKPSPAAAAAGAG 134
            .||.|.:|.:|.:|.|:.|||.|||:|.|:.|.||:..||||:|||||: ||..|.|        
  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTD-NDPAPQP-------- 125

  Fly   135 ATGSESTATTPQLQRIQPYLVP----QRNRSQAG----------GLLASAANAGNTPTLPVQPSL 185
               .:.::..|....:|...:|    ||.:.:|.          ||   .....:|..:.:|.:.
  Fly   126 ---PQESSPPPAAPHVQQQQIPAQRVQRQQPRASARYKIETVDDGL---GDEKQSTTQIVIQTTA 184

  Fly   186 LSSALMPKRKRGRPRKLSGSSNGTGNDYDDFDRENMMNDSSDLGNGKMCNESYSGNDDGSDDNQP 250
            ...|.:.:::  :|::.:                 ....|..|..|.....:....:..|     
  Fly   185 APQATIVQQQ--QPQQAA-----------------QQIQSQQLQTGTTTTATLVSTNKRS----- 225

  Fly   251 NAGHTDDLNESRDSLPSKRSKNSKDHRVVSHHEDNSTSVTPTKATPELSQRLFGSSSTTISATAP 315
              .....|..:..|...||||.|....|:...:  ||:.|....|.:|..:.....::.:||...
  Fly   226 --AQRSSLTPASSSAGVKRSKTSTSANVMDPLD--STTETGATTTAQLVPQQITVQTSVVSAAEA 286

  Fly   316 GGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAINTTTPAQQGSPQTPTKSKPKIRQATGS 380
            ......|.:.       .:.|:..:.||.                    :.||||:|...:..|.
  Fly   287 KLHQQSPQQV-------RQEEAEYIDLPM--------------------ELPTKSEPDYSEDHGD 324

  Fly   381 NNSNSLLKQQLRGGAKDPEVPPATRITGAVTPNAALNAEEQSKEMPKKNQDEVNACIGLHSLANA 445
                         .|.|.|        |....:..............:|:|             |
  Fly   325 -------------AAGDAE--------GTYVEDDTYGDMRYDDSYFTENED-------------A 355

  Fly   446 AEQQAAQVASTGNLHHQLLLHMAANNSMLNTTDYYQQQQQESPSSAGQFMDDDLELLSLNDQQDK 510
            ..|.||..:..|               :..||.....:||....|...|:|..            
  Fly   356 GNQTAANTSGGG---------------VTATTSKAVVKQQSQNYSESSFVDTS------------ 393

  Fly   511 SDEPDHEMVTLADENAGLPGYQGN-EAEATPAQEDSPAAETATAPPPAPRSGKKGAKRPIQ--RR 572
                               |.||| ||:|.       .:.:||..||..| |:...|...|  :.
  Fly   394 -------------------GDQGNTEAQAA-------TSASATKIPPRKR-GRPKTKVEDQTPKP 431

  Fly   573 RVRRKAQ-STLDDQAE-------------------HLTEMSVRGLDLFRYASVVEGVYRCTECAK 617
            ::..|.| :||:::|.                   ||.:.|.|..|.        .|::|  |.:
  Fly   432 KLLEKLQAATLNEEASEPAVYASTTKGGVKLIFNGHLFKFSFRKADY--------SVFQC--CYR 486

  Fly   618 ENMQKTFKNKYSFQRHAFLYHEGKHRKVFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKD--IGA 680
            |:.::........|:..|.| ||:|.....   .|.:...|.:           |.|.:.  |.:
  Fly   487 EHGEECKVRVVCDQKRVFPY-EGEHVHFMQ---ASDKSCLPSQ-----------FMPGESGVISS 536

  Fly   681 FSPLKYLISAAAAGDMHATIYQQQQDHYHRQLAEQLEQQNASFDSRDSSLILPDVKMEHAEDQDA 745
            .||.|.|:       |..|...::.|....:..|:.|.|.           :.:::::..|...|
  Fly   537 LSPSKELL-------MKNTTKLEEADDKEDEDFEEFEIQE-----------IDEIELDEPEKTPA 583

  Fly   746 EQE 748
            ::|
  Fly   584 KEE 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttkNP_733443.1 BTB_POZ_BAB-like 32..115 CDD:349624 43/83 (52%)
PTZ00112 <184..>309 CDD:240274 19/124 (15%)
C2H2 Zn finger 612..638 CDD:275370 5/25 (20%)
zf-C2H2_4 646..669 CDD:464025 2/22 (9%)
C2H2 Zn finger 648..669 CDD:275370 2/20 (10%)
mod(mdg4)NP_788698.1 BTB_POZ_BAB-like 31..115 CDD:349624 43/83 (52%)
FLYWCH 452..512 CDD:461332 15/70 (21%)

Return to query results.
Submit another query.