DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttk and mod(mdg4)

DIOPT Version :9

Sequence 1:NP_001189329.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster


Alignment Length:783 Identity:172/783 - (21%)
Similarity:273/783 - (34%) Gaps:241/783 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEK-H 69
            ::|.|.|||..:||.:.|.:.|......||:||.|||.:|||::|||.|||:|..:|...|.. |
  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69

  Fly    70 PIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDDKPSPAAAAAGAG 134
            .||.|.:|.:|.:|.|:.|||.|||:|.|:.|.||:..||||:|||||: ||..|.|        
  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLTD-NDPAPQP-------- 125

  Fly   135 ATGSESTATTPQLQRIQPYLVP----QRNRSQAG----------GLLASAANAGNTPTLPVQPSL 185
               .:.::..|....:|...:|    ||.:.:|.          ||   .....:|..:.:|.:.
  Fly   126 ---PQESSPPPAAPHVQQQQIPAQRVQRQQPRASARYKIETVDDGL---GDEKQSTTQIVIQTTA 184

  Fly   186 LSSALMPKRKRGRPRKLSGSSNGTGNDYDDFDRENMMNDSSDLGNGKMCNESYSGNDDGSDDNQP 250
            ...|.:.:::  :|::.:                 ....|..|..|.....:....:..|     
  Fly   185 APQATIVQQQ--QPQQAA-----------------QQIQSQQLQTGTTTTATLVSTNKRS----- 225

  Fly   251 NAGHTDDLNESRDSLPSKRSKNSKDHRVVSHHEDNSTSVTPTKATPELSQRLFGSSSTTISATAP 315
              .....|..:..|...||||.|....|:...:  ||:.|....|.:|..:.....::.:||...
  Fly   226 --AQRSSLTPASSSAGVKRSKTSTSANVMDPLD--STTETGATTTAQLVPQQITVQTSVVSAAEA 286

  Fly   316 GGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAINTTTPAQQGSPQTPTKSKPKIRQATGS 380
            ......|.:.       .:.|:..:.||.                    :.||||:|...:..|.
  Fly   287 KLHQQSPQQV-------RQEEAEYIDLPM--------------------ELPTKSEPDYSEDHGD 324

  Fly   381 NNSNSLLKQQLRGGAKDPEVPPATRITGAVTPNAALNAEEQSKEMPKKNQDEVNACIGLHSLANA 445
                         .|.|.|        |....:..............:|:|             |
  Fly   325 -------------AAGDAE--------GTYVEDDTYGDMRYDDSYFTENED-------------A 355

  Fly   446 AEQQAAQVASTGNLHHQLLLHMAANNSMLNTTDYYQQQQQESPSSAGQFMDDDLELLSLNDQQDK 510
            ..|.||..:..|               :..||.....:||....|...|:|..            
  Fly   356 GNQTAANTSGGG---------------VTATTSKAVVKQQSQNYSESSFVDTS------------ 393

  Fly   511 SDEPDHEMVTLADENAGLPGYQGN-EAEATPAQEDSPAAETATAPPPAPRSGKKGAKRPIQ--RR 572
                               |.||| ||:|.       .:.:||..||..| |:...|...|  :.
  Fly   394 -------------------GDQGNTEAQAA-------TSASATKIPPRKR-GRPKTKVEDQTPKP 431

  Fly   573 RVRRKAQ-STLDDQAE-------------------HLTEMSVRGLDLFRYASVVEGVYRCTECAK 617
            ::..|.| :||:::|.                   ||.:.|.|..|.        .|::|  |.:
  Fly   432 KLLEKLQAATLNEEASEPAVYASTTKGGVKLIFNGHLFKFSFRKADY--------SVFQC--CYR 486

  Fly   618 ENMQKTFKNKYSFQRHAFLYHEGKHRKVFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKD--IGA 680
            |:.::........|:..|.| ||:|.....   .|.:...|.:           |.|.:.  |.:
  Fly   487 EHGEECKVRVVCDQKRVFPY-EGEHVHFMQ---ASDKSCLPSQ-----------FMPGESGVISS 536

  Fly   681 FSPLKYLISAAAAGDMHATIYQQQQDHYHRQLAEQLEQQNASFDSRDSSLILPDVKMEHAEDQDA 745
            .||.|.|:       |..|...::.|....:..|:.|.|.           :.:::::..|...|
  Fly   537 LSPSKELL-------MKNTTKLEEADDKEDEDFEEFEIQE-----------IDEIELDEPEKTPA 583

  Fly   746 EQE 748
            ::|
  Fly   584 KEE 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttkNP_001189329.1 BTB 23..119 CDD:279045 49/96 (51%)
BTB 34..119 CDD:197585 47/85 (55%)
C2H2 Zn finger 612..638 CDD:275370 5/25 (20%)
zf-C2H2_4 646..669 CDD:290605 2/22 (9%)
C2H2 Zn finger 648..669 CDD:275370 2/20 (10%)
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 48/95 (51%)
BTB 33..118 CDD:197585 46/84 (55%)
FLYWCH 452..512 CDD:282369 15/70 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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