DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttk and BtbVII

DIOPT Version :9

Sequence 1:NP_001189329.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_647774.2 Gene:BtbVII / 38376 FlyBaseID:FBgn0263108 Length:907 Species:Drosophila melanogaster


Alignment Length:695 Identity:189/695 - (27%)
Similarity:270/695 - (38%) Gaps:202/695 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPE 67
            |:.|:|||||||||.|.:||...|||..|..|||||.||:.|:|||:||||||.||..||.::|.
  Fly     1 MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPC 65

  Fly    68 KHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEV---------NDDK 123
            :|||||||||.|.|:|:::||||.|||:|.||:|...|:.||.|:||||.|:         :|.|
  Fly    66 QHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSK 130

  Fly   124 PSP-----------------AAAAAGAGATGSE-----STATTPQLQRIQPYLVPQR-------- 158
            .|.                 :|.:.|||:..|.     |::...|.|:.|.....|:        
  Fly   131 SSTDGTEMVGGAGVGTGAGNSAGSLGAGSGSSVGDSLWSSSEAQQFQQQQQQQAQQQAQQQHHHH 195

  Fly   159 --------------------------NRSQAGGLLASAANAGNTPTLPVQ--PSLLSSALMPKRK 195
                                      ::.|..|    .|.|..|....::  ||.||:...|..:
  Fly   196 QQQQQLQQQQQQAQQQQQQQQHHHHHHQQQQSG----QAQAAQTHHHQMRRTPSPLSAGTSPATR 256

  Fly   196 RGRPRKLSGSSNGTGNDYDDFDRENMMNDSSDLGNG--------KMCNESYSGNDDGSDDNQPNA 252
            |.|.||  .|:||:|   |..:.|...|.|.|.|:|        ...|:...|...|.      |
  Fly   257 RKRLRK--SSNNGSG---DRNNAEEQHNSSLDAGSGAGNAGLSLAQMNQMTFGAGGGL------A 310

  Fly   253 GHTDDLNES---RDSLPSKRSKNSKDHRVVSHHEDNSTSVTPTKATPELSQRLFGSSSTTISATA 314
            ||:  |:.:   ::|..::..:..:|..:     |:.......:..||:.   .|..:.|:....
  Fly   311 GHS--LHAAKLLKESASAELEQQPQDSDL-----DDGHGHLHMQIKPEVD---IGGVNQTMPLDI 365

  Fly   315 PGGSSTGPSETISLLEISDERESAPVHLPTILGLKIRAINTTTPAQQGSPQTPTKSKPKIRQATG 379
            .||  |.|||..:....|...|.:|.|.|                   .|..|    |....::.
  Fly   366 SGG--TTPSEHDAPNSQSSHSEPSPAHAP-------------------HPPHP----PLGAASSS 405

  Fly   380 SNNSNSLLKQQLRGGAK----DPEVPPATRITGAVTPNAAL----NAEEQSKEMPKKNQ------ 430
            |..|.|..:....||..    ||:..|::........|..|    ..:..|..:...||      
  Fly   406 SGGSGSFERSFSIGGVGSVECDPDGTPSSPAVMGTKRNRVLTRQPRVKRDSDSISSTNQISPDTA 470

  Fly   431 ------DEVNACIGLHSLANAAEQQAAQVASTG--NLHHQLLLHMAANNSMLNTTDYYQQQQQE- 486
                  |..||       |.|....|...::||  :||||..:|  .::.:|......::...| 
  Fly   471 ATTLDFDPFNA-------AGATSATARDYSTTGSHHLHHQSAVH--HHHHLLTVPPRIERHASEP 526

  Fly   487 SPSSAGQFMDDDLELLSLNDQ-----QDKSDE--PDHEMVTLADENAG----------------- 527
            :||.|    .....|||:...     :..||.  |....:.:|...:|                 
  Fly   527 APSLA----PSTPHLLSVPSSTPYLIKQHSDPLLPRQSALHMAGSGSGSSSAMATGSNPFAPLHR 587

  Fly   528 -----LPGYQGNEAEATPAQEDSP-------AAETATAPPPAPRS 560
                 |.|  .|.:..|||....|       :...:.:||||..|
  Fly   588 QYSHPLSG--SNASYVTPAPLHHPHHISLPESIYASGSPPPAGSS 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttkNP_001189329.1 BTB 23..119 CDD:279045 57/95 (60%)
BTB 34..119 CDD:197585 53/84 (63%)
C2H2 Zn finger 612..638 CDD:275370
zf-C2H2_4 646..669 CDD:290605
C2H2 Zn finger 648..669 CDD:275370
BtbVIINP_647774.2 BTB 24..117 CDD:279045 57/92 (62%)
BTB 32..117 CDD:197585 53/84 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.020

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