DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttk and lov

DIOPT Version :9

Sequence 1:NP_001189329.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster


Alignment Length:599 Identity:152/599 - (25%)
Similarity:240/599 - (40%) Gaps:140/599 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIV 72
            :.|||||||:::|..||.||..:|..||||......::|||||||||||:|..:|...|.|||::
  Fly   115 YSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVI 179

  Fly    73 ILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE--VNDDKPSPAAAAAGAGA 135
            :|||.....:::::|||||||:||.|:||...::..|||:::||.|  |.:..|:|||:....|.
  Fly   180 VLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGM 244

  Fly   136 TGSESTATTPQLQRIQPYLVPQRNRSQAGG--LLASAANAGNTPT------------------LP 180
            ..:...::|.:.:      .|...|...||  |:.||...||..:                  |.
  Fly   245 LDTSMLSSTFEDE------CPTMVRPSKGGKLLMPSARLFGNASSAIAALGLRRKREQESDRDLE 303

  Fly   181 VQPSLLSSALMPKRKRGRPRKLSG------SSNGTG-----------------NDYDDF-DRENM 221
            ....|..|:.||:||:.|||:.||      :.|.|.                 .|.::. |::|.
  Fly   304 SDQELGGSSPMPRRKQARPRRRSGDVPHDFTLNKTDAESLQTVIKHELLERAERDQEEAPDQDNS 368

  Fly   222 MNDSSDLGNG------KMCNESYSGNDDGSDDNQPNAGHTDDLNESRDSLPSKRSKNSKDHRVVS 280
            ..::..:.:.      :...|..|..::|||  ||.:     |||:...|    ..:.:|.....
  Fly   369 QGEAEKISSSPAKTLVERAKEQKSMKEEGSD--QPRS-----LNENHHQL----ELDDEDDDDQD 422

  Fly   281 HHEDNSTSVTPTKATPELSQRLFGSSSTTISATAPGGS---STGPSETISLLE----ISDERESA 338
            |.|:....:.....|....:|...:::...:|.:|..|   |.||.:..:..:    ||....||
  Fly   423 HEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNPSPCLSDGPEDLCTTKKGKELISGPSSSA 487

  Fly   339 PVHLPTILGLKIRAINTTTPAQQGSPQTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEV--- 400
                      ...:.|..:...|.:.|....|...|||...:.|..::.......|..:..:   
  Fly   488 ----------DCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGLLTFP 542

  Fly   401 PPATRITGAVTPNAALNAEEQSKEMPKKNQDEVNACIGLHSLANAAEQQAAQVASTGNLHHQLLL 465
            ||..|..|.             .:.|..:.:.:.|  .:|:.|      ||.||:.|:..|. ..
  Fly   543 PPGLRPPGL-------------PDSPPCHMEALEA--QMHAAA------AAAVAAAGSGEHP-FH 585

  Fly   466 HMAANNSMLNTTDYYQQQQQESPSSAGQFMDDDLELLSLNDQQDKSDEPDHE-----------MV 519
            ||.           :|.:...:.::|...|..       .:.:|..|..||.           |.
  Fly   586 HME-----------HQMEMSLAAAAAAAAMHQ-------REPRDPRDGRDHNAFASNLLGPMGMP 632

  Fly   520 TLADENAGLPGYQG 533
            .....|.|.||..|
  Fly   633 PFGGHNGGHPGNSG 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttkNP_001189329.1 BTB 23..119 CDD:279045 47/97 (48%)
BTB 34..119 CDD:197585 42/86 (49%)
C2H2 Zn finger 612..638 CDD:275370
zf-C2H2_4 646..669 CDD:290605
C2H2 Zn finger 648..669 CDD:275370
lovNP_611994.3 BTB 130..225 CDD:279045 46/94 (49%)
BTB 141..226 CDD:197585 41/84 (49%)
HTH_psq 791..834 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.020

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