DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttk and CG3726

DIOPT Version :9

Sequence 1:NP_001189329.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster


Alignment Length:554 Identity:136/554 - (24%)
Similarity:216/554 - (38%) Gaps:145/554 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSH-P 66
            |..|::||||..|.|||.::|.|||....|.|||||.|||.::||::||.|||.:|:.:..:: .
  Fly     1 MLPQQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYAS 65

  Fly    67 EKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEV----NDDKPSPA 127
            |:.||:|:|||.::::|.|::|||:||::|:...|.:.|:.|:.|:||||.||    ::|.|.|.
  Fly    66 ERDPIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPP 130

  Fly   128 AAAA-------GAGATGSESTATTPQLQRIQPYLVPQRNRSQAGGLL--------------ASAA 171
            .|||       ....:.::......|.|:.|....|..|...:..||              .|..
  Fly   131 MAAAEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPLNLHSSAALLERDRERERERDRERLSPG 195

  Fly   172 NAGNTPTLPVQPSLLSSA-----------------------LMPKRKRGRPRKLSGSSNGTGNDY 213
            ..|....:||...|..::                       |.||||||||        ...:.|
  Fly   196 MEGVLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVAPVEHFLGPKRKRGRP--------PLDDAY 252

  Fly   214 DDFDRENMMNDSSDLGNGKMCNESYSGNDDGSDDNQPNAGHTDDLNESRDSLPSKRSKNSKDHRV 278
            |.|:...:...:::|   :....:|........:..|.|.|...:.....:.|.|:.:.      
  Fly   253 DVFNVRKLAQYAANL---EPAQRAYLETARHFTEEPPLAAHAASMASPPAACPPKQRQR------ 308

  Fly   279 VSHHEDNSTSVTPTKATPELSQRLFGSSSTTISATAPGGSSTGPSETISLLEISD----ERESAP 339
            :.|.:.....:..::::.: .|...|...:.:.   |.||:|.     .||...|    |.|...
  Fly   309 LRHQQQQQQQLLQSESSDQ-EQPAAGQDWSNLE---PNGSATP-----KLLSDGDANKQETEGGD 364

  Fly   340 VHLPTILGLKIRAINTTTPAQQGSPQTPTKSKPKIRQATGSNNSNSLLKQQLRGGAKDPEVPPAT 404
            ..||.:|         ||.:..|     ||...||.:....:......::......:|...||  
  Fly   365 ESLPAVL---------TTASSSG-----TKKLEKIGERRERHGKLRHARRLYEKSGEDEVDPP-- 413

  Fly   405 RITGAVTPNAALNAEEQSKEMPKKNQDEVNACIGLHSLANAAEQQAAQV---------------- 453
                          :|:..|:|:..::..|.    |.:||.||.....|                
  Fly   414 --------------KEEPDELPQPVEEIENE----HLVANRAESPRPTVVIPASFACKYEGGVTA 460

  Fly   454 ------ASTG----------NLHHQLLLHMAANN 471
                  :.||          |.|..|:.|..|.|
  Fly   461 AGGGSGSGTGSGSLGSSYLINEHGMLMAHEFAPN 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttkNP_001189329.1 BTB 23..119 CDD:279045 44/96 (46%)
BTB 34..119 CDD:197585 39/85 (46%)
C2H2 Zn finger 612..638 CDD:275370
zf-C2H2_4 646..669 CDD:290605
C2H2 Zn finger 648..669 CDD:275370
CG3726NP_001284917.1 BTB 21..118 CDD:279045 44/96 (46%)
BTB 32..121 CDD:197585 41/88 (47%)
HTH_psq 587..622 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.110

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