DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttk and Btbd18

DIOPT Version :10

Sequence 1:NP_733443.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_001417674.1 Gene:Btbd18 / 100363270 RGDID:2323370 Length:724 Species:Rattus norvegicus


Alignment Length:549 Identity:124/549 - (22%)
Similarity:184/549 - (33%) Gaps:150/549 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FDQLLHAE---TFTDVTLAVEGQHLKAHKMVLSACSPYF-NTLFVSHPEKHPIVILK--DVPYSD 81
            |.||.|.:   .|.|..|..||:.:.||..:||||||:| ..|....|.:...|:|:  .:....
  Rat    21 FLQLHHQQQSGVFCDALLQAEGEAVPAHCCILSACSPFFTERLERERPVQGRKVVLELGGLKIQT 85

  Fly    82 MKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDDKPSPAAAAAGAGATGSESTATTPQ 146
            ::.|:||:|..|:.|.||.....|..|..||:                          |...|.|
  Rat    86 LRKLVDFLYTSEMEVSQEEAQDVLSAARQLRV--------------------------SELETLQ 124

  Fly   147 LQRIQPYLVPQRNRSQAGGLLASAANAGNTPTLPVQPSLLSSALMPKR---KRGRPRKLSGSSNG 208
            |:               ||.|..|..........:||.  |:|.:..|   .|.|||        
  Rat   125 LE---------------GGKLVKAPQGRRLNRECLQPP--SAAPISARVVVPRSRPR-------- 164

  Fly   209 TGNDYDDFDRENMMNDSSDLGNGKMCNESYSGNDDGS--DDNQPNAGHTDD-----------LNE 260
                    ....:....|.||..|:   ...|.::|:  ..|.|||.:..|           |.:
  Rat   165 --------TPLPVTQTPSPLGAVKL---KSLGEEEGAHKKSNLPNADNLSDTLLLKKKARVCLTQ 218

  Fly   261 SRDSLPSKRSKNSKDHRVVSHHEDNSTSVTPTKATPELSQRLFGSS-STTISATAPGGSSTGPSE 324
            .|.|.||.:.:..|:::      .|..|.......|.:.::|.... ..:.|..:|...::.||.
  Rat   219 ERSSSPSSQREGPKENK------SNPGSTALPSLYPSVDEQLLPRKIRLSRSKPSPHVYTSKPSS 277

  Fly   325 TISLLEISDERESAPVHLPTILGLKIRAINTTTPAQQGSPQTPTKSKP---KIRQATGSNNSNSL 386
            .:          |.|..:||..|.::....|.:.|.||    ..|.||   ...|:|        
  Rat   278 ML----------SGPSSMPTAPGRRLWRQRTVSEATQG----VDKQKPGEVSTLQST-------- 320

  Fly   387 LKQQLRGGAKDPEVPPATRITGAVTPNAALNAEEQSKEMPKKNQDEVNAC--IGLHSLANAAEQQ 449
                       |:.|...:..|...|:....|       |..|..|....  :.|..:.|....:
  Rat   321 -----------PDPPDVGKTGGKKQPSPESRA-------PASNSVEEGQVGRVKLRKIVNGTCWE 367

  Fly   450 AAQVASTGNLHH--QLLLHMAAN---NSMLNTTDYYQQQQQESPSSAGQFMDDDLELLSLND-QQ 508
            ..|.....|...  |:|....|:   .::|::.:     :||.|:.. |...|..|...|.| ..
  Rat   368 VVQEPPIRNTQDSPQILESSDADEPPGTLLSSVN-----EQEIPARI-QLCHDSPENSRLQDILL 426

  Fly   509 DKSDEPDHEMVTLADENAGLPGYQGNEAE 537
            ..|..|||.:|  ..|....|...|.|.|
  Rat   427 SASHSPDHPVV--KSEFGSSPMLTGKEPE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttkNP_733443.1 BTB_POZ_BAB-like 32..115 CDD:349624 30/85 (35%)
PTZ00112 <184..>309 CDD:240274 28/141 (20%)
C2H2 Zn finger 612..638 CDD:275370
zf-C2H2_4 646..669 CDD:464025
C2H2 Zn finger 648..669 CDD:275370
Btbd18NP_001417674.1 None
Blue background indicates that the domain is not in the aligned region.

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