DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTry and CG17242

DIOPT Version :9

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001259921.1 Gene:CG17242 / 59226 FlyBaseID:FBgn0250841 Length:245 Species:Drosophila melanogaster


Alignment Length:256 Identity:89/256 - (34%)
Similarity:130/256 - (50%) Gaps:26/256 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKIVILLSAVVCALGGTVPEGLLPQL--DGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSA 63
            :||.::||.::.             |:  |.:.:|     |...|||.|:|.:..|.|||.|||.
  Fly     2 LLKGILLLVSIA-------------QIAADFKSIG-----IEQAPWQASVQINDKHHCGGVIYSE 48

  Fly    64 NIIVTAAHCLQSVSASVLQVRAGSTYWSSGGVVAKVSSFKNHEGYNANTMVNDIAVIRLSSSLSF 128
            :||:|.|.|::......:.||.||...::||.|.||...:...   .....:|:|:::|.|.|..
  Fly    49 DIILTIAECVRKARLEFISVRVGSAQENAGGTVLKVEKMRLQV---LGLRPSDVAILQLRSPLYL 110

  Fly   129 SSSIKAISLATYNPANGASAAVSGWGTQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRN 193
            ...|:||.|||.....|.:|:||||| |.|..:.....|..|:|.|..|..||::....|..:..
  Fly   111 DGGIRAIPLATIPLVPGTNASVSGWG-QLSAMNPSSEVLLRVDVKIQDQLMCATNLALKGRLMSV 174

  Fly   194 TMICAAASGK--DACQGDSGGPLVSGGVLVGVVSWGYGCAYSNYPGVYADVAVLRSWVVST 252
            ..||||.:|:  .||||..|||||:...|.|::||...|...|...|||::|:.:.|:.||
  Fly   175 GEICAAPAGEIPYACQGFVGGPLVANNRLYGILSWQSACDVLNKSSVYANIAMFKVWIEST 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 80/220 (36%)
CG17242NP_001259921.1 Tryp_SPc 24..235 CDD:238113 80/214 (37%)
Tryp_SPc 24..232 CDD:214473 79/211 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 1 1.000 - - FOG0000678
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.