DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTry and Prss53

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_006230384.1 Gene:Prss53 / 499270 RGDID:1566127 Length:591 Species:Rattus norvegicus


Alignment Length:303 Identity:73/303 - (24%)
Similarity:129/303 - (42%) Gaps:67/303 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVIL--LSAVVCALGGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSANII 66
            ::::  |.|...|.|...|....|| :|..:.|      .:|||.|::|.|.|.|.||:.:...:
  Rat    15 VIVIEGLQAAQRACGQRGPGPPEPQ-EGNTLPG------EWPWQASVRRQGVHICSGSLVADTWV 72

  Fly    67 VTAAHCLQSVSASVL---QVRAGSTY---WSSGGVVAKVSSFKNHEGYNANTMVNDIAVIRLSSS 125
            :|||||.:.::.:.|   .|..||..   .|.|.....|::.:..:.||..:..:|:|:::|:..
  Rat    73 LTAAHCFEKMATAELSSWSVVLGSLKQEGLSPGAEEVGVAALQLPKAYNHYSQGSDLALLQLTHP 137

  Fly   126 LSFSSSIKAISLATYNPANGASAAVSGWGTQSSGSSSIP------SQ------------------ 166
            :..::  ..:...|::...|||...:||...:|.....|      ||                  
  Rat   138 IVHTT--LCLPQPTHHFPFGASCWATGWDQNTSDGKYCPRHKSRESQTGSVLTVLALCSHCVSEL 200

  Fly   167 ------------LQYVNVNIVSQSQCASSTYG------YGSQIRNTMICAAASG--KDACQGDSG 211
                        |:.:.:.::|:..| :..|.      ..:..|:.|:|..|..  :..||||||
  Rat   201 DSTLSPLPVSRTLRNLRLRLISRPTC-NCLYNRLHQRLLANPARSGMLCGGAQPGVQGPCQGDSG 264

  Fly   212 GPLV-----SGGVLVGVVSWGYGCAYSNYPGVYADVAVLRSWV 249
            ||::     ...|.||::|:...||..:.|.:..|:|...||:
  Rat   265 GPVMCREPDGHWVQVGIISFTSNCAQEDTPVLLTDMAAHSSWL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 64/273 (23%)
Prss53XP_006230384.1 Tryp_SPc 45..310 CDD:238113 65/272 (24%)
Tryp_SPc 341..561 CDD:238113
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.