DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTry and tmprss2

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:240 Identity:99/240 - (41%)
Similarity:132/240 - (55%) Gaps:31/240 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVGGSATTISS---FPWQISLQRSGSHSCGGSIYSANIIVTAAHCLQSVS-ASVLQVRAG---- 86
            |||||  ||::|   :|||:||..||.|.|||||.:...|:|||||:...| .....|.||    
Zfish   251 RIVGG--TTVTSKGVWPWQVSLHYSGRHLCGGSIITPYWILTAAHCVHQFSNPGGWTVYAGYLTQ 313

  Fly    87 STYWSSGGVVAKVSSFKNHEGYNANTMVNDIAVIRLSSSLSFSSSIKAISLATYNPANGAS---- 147
            |...|:.|  ..|:....|: :|.||..||||::||:::|:.|::|:.:.|    |..|.|    
Zfish   314 SEMASASG--NSVNRIVIHD-FNPNTNENDIALMRLNTALTISTNIRPVCL----PNKGMSFTAQ 371

  Fly   148 --AAVSGWGTQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRNTMICAA--ASGKDACQG 208
              ..|:|||...||.|| .:.||...:.::..:.|.|... |...|.:|||||.  |.|.|:|||
Zfish   372 QDCYVTGWGALFSGGSS-SATLQEAKIQLIDSTICNSRPV-YNGLITDTMICAGKLAGGVDSCQG 434

  Fly   209 DSGGPLVSG----GVLVGVVSWGYGCAYSNYPGVYADVAVLRSWV 249
            |||||||:.    ..|:|..|||.|||..|.||||.:|.....|:
Zfish   435 DSGGPLVTNVRSLWWLLGDTSWGDGCAVRNKPGVYGNVTYFLDWI 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 98/238 (41%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:470597
Tryp_SPc 252..482 CDD:238113 98/239 (41%)
Blue background indicates that the domain is not in the aligned region.

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