DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTry and Sems

DIOPT Version :9

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster


Alignment Length:239 Identity:74/239 - (30%)
Similarity:118/239 - (49%) Gaps:21/239 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLPQLDGRIVGGSATTISSF-PWQISLQRSGSHSCGGSIYSANIIVTAAHCLQSVSASVLQVRAG 86
            |.|....|::||..||.:.. .:.::::...:..|||::....|::|||||.:.        ||.
  Fly    36 LPPAYQTRVIGGRVTTNAKLGGYLVAMRYFNNFICGGTLIHELIVLTAAHCFED--------RAE 92

  Fly    87 STYWSSGGVVAKVSS---------FKNHEGYNANTMVNDIAVIRLSSSLSFSSSIKAISLATYNP 142
            ...||..|.::::|.         |.....:...||..|:||:.|:..: ...:|..:||.:...
  Fly    93 KEAWSVDGGISRLSEKGIRRQVKRFIKSAQFKMVTMNMDVAVVLLNRPM-VGKNIGTLSLCSTAL 156

  Fly   143 ANGASAAVSGWGTQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRNTMICAAASG-KDAC 206
            ..|.:..|||||..:.........|:.|:|.::.:..|..: |.....|.::|.||:..| ||||
  Fly   157 TPGQTMDVSGWGMTNPDDEGPGHMLRTVSVPVIEKRICREA-YRESVSISDSMFCASVLGKKDAC 220

  Fly   207 QGDSGGPLVSGGVLVGVVSWGYGCAYSNYPGVYADVAVLRSWVV 250
            ..|||||||....:.|:||:|.|||...|||||.||..::.::|
  Fly   221 TYDSGGPLVYEKQVCGIVSFGIGCASRRYPGVYTDVHYVKPFIV 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 71/229 (31%)
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 71/229 (31%)
Tryp_SPc 44..265 CDD:238113 71/231 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.