DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTry and LPA

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:258 Identity:82/258 - (31%)
Similarity:117/258 - (45%) Gaps:66/258 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PQLD-----GRIVGGSATTISSFPWQISLQ-RSGSHSCGGSIYSANIIVTAAHCLQSVSASVLQV 83
            ||::     |.||||......|:|||:||: |.|.|.|||::.|...::||||||:..|      
Human  1809 PQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCLKKSS------ 1867

  Fly    84 RAGSTYWSSGGVVAKVSSFK----NHEGYNANTMVN--------------DIAVIRLSSSLSFSS 130
                          :.||:|    .|:..|..:.|.              |||:::||.....:.
Human  1868 --------------RPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAVITD 1918

  Fly   131 SIKAISLAT--YNPANGASAAVSGWG-TQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIR 192
            .:....|.:  |.........::||| ||.:..:.:..:.|.:   ::....|  :.|.|     
Human  1919 KVMPACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLL---VIENEVC--NHYKY----- 1973

  Fly   193 NTMICA--AASGKDACQGDSGGPLV----SGGVLVGVVSWGYGCAYSNYPGVYADVAVLRSWV 249
               |||  .|.|.|:||||||||||    ...:|.||.|||.|||..|.|||||.|:...:|:
Human  1974 ---ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARVSRFVTWI 2033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 78/246 (32%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388
KR 1386..1466 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527
Kringle 1720..1799 CDD:395005
Tryp_SPc 1820..2034 CDD:238113 79/247 (32%)
Blue background indicates that the domain is not in the aligned region.

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