DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTry and Klk10

DIOPT Version :9

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001004100.1 Gene:Klk10 / 292850 RGDID:1303242 Length:279 Species:Rattus norvegicus


Alignment Length:256 Identity:74/256 - (28%)
Similarity:113/256 - (44%) Gaps:44/256 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GGTVPEGLLPQLDGRIVGGSATTISSFPWQISLQRSGSHSCGGSIYSANIIVTAAHCLQSVSASV 80
            |.|..|.|      ...|....::|. |||:||..:....|.|.:...|.::|||||.::   ..
  Rat    39 GNTTREDL------EAFGTLCPSVSQ-PWQVSLFHNLQFQCAGVLVDQNWVLTAAHCWRN---KP 93

  Fly    81 LQVRAGSTYWSSGGVVAKVSSFKNHEGYNANTMV-------------------NDIAVIRLSSSL 126
            |:.|.|..:         :..|::.:..:.|:.|                   :|:.:::|||.:
  Rat    94 LRARVGDDH---------LLLFQSEQLRSTNSPVFHPKYQPCSGPVLPLRSDEHDLMMLKLSSPV 149

  Fly   127 SFSSSIKAISLATYNPANGASAAVSGWGTQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQI 191
            ..:|.:..:.|............||||||.::........|....|.::||.||  .|: |...|
  Rat   150 VLTSKVHPVQLPFQCAQPRQECQVSGWGTTANRRVKYNRSLSCSRVTLLSQKQC--ETF-YPGVI 211

  Fly   192 RNTMICAAAS-GKDACQGDSGGPLVSGGVLVGVVSWG-YGC-AYSNYPGVYADVAVLRSWV 249
            .|.||||... .:|:||.|||||||....|.|::||. |.| |.:.||.|||.:....:|:
  Rat   212 TNNMICAGMDRDQDSCQSDSGGPLVCDNTLHGILSWSIYPCGAATQYPAVYAKICNYTNWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 69/240 (29%)
Klk10NP_001004100.1 Tryp_SPc 50..272 CDD:214473 69/237 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 148 1.000 Domainoid score I4330
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X21
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.