DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTry and Prss34

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001099242.1 Gene:Prss34 / 287140 RGDID:1306667 Length:316 Species:Rattus norvegicus


Alignment Length:264 Identity:94/264 - (35%)
Similarity:130/264 - (49%) Gaps:33/264 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LGGTVPEGLLP----QLDGRIVGGSATTISSFPWQISLQ------RSGSHSCGGSIYSANIIVTA 69
            ||.|:|  |.|    :|.| ||||...:.|.||||:||:      ....|.||||:.....::||
  Rat    16 LGSTMP--LTPDSGQELVG-IVGGCPVSASRFPWQVSLRFYNMKLSKWEHICGGSLIHPQWVLTA 77

  Fly    70 AHC--LQSVSASVLQVRAGSTYWSSGGVVAKVSSFKNHEGYNANTMV---NDIAVIRLSSSLSFS 129
            |||  |:.:.||..:|:.|.........:.||:....|..::.....   .|||:::|.|::..|
  Rat    78 AHCVELKEMEASCFRVQVGQLRLYENDQLMKVAKIIRHPKFSEKLSAPGGADIALLKLDSTVVLS 142

  Fly   130 SSIKAISL--ATYNPANGASAAVSGWGTQSSGSSSI--PSQLQYVNVNIVSQSQCASSTYGYGSQ 190
            ..:..:||  |:...::..:..|:|||. ..|...:  |..|:.|.|.||..|.|......|.|.
  Rat   143 ERVHPVSLPAASQRISSKKTWWVAGWGV-IEGHRPLPPPCHLREVAVPIVGNSDCEQKYRTYSSL 206

  Fly   191 IRNT------MICAAASGKDACQGDSGGPLV----SGGVLVGVVSWGYGCAYSNYPGVYADVAVL 245
            .|.|      |:||...|:|:||.|||||||    ...|.|||||||.||...::||||..|...
  Rat   207 DRTTKIIKDDMLCAGMEGRDSCQADSGGPLVCRWNCSWVQVGVVSWGIGCGLPDFPGVYTRVMSY 271

  Fly   246 RSWV 249
            .||:
  Rat   272 LSWI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 85/243 (35%)
Prss34NP_001099242.1 Tryp_SPc 33..276 CDD:238113 86/244 (35%)

Return to query results.
Submit another query.