DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTry and Gzma

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:259 Identity:71/259 - (27%)
Similarity:118/259 - (45%) Gaps:26/259 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSAVVCALGGTVPEGLLPQLDG--RIVGGSATTISSFPWQISLQRSGSHSCGGSIYSANIIVTAA 70
            |:.|:..|  .:|||      |  ||:||......|.|:.:.|:......|.|::.:.|.::|||
  Rat    12 LTTVIFLL--LIPEG------GCERIIGGDTVVPHSRPYMVLLKLKPDSVCAGALIAKNWVLTAA 68

  Fly    71 HCLQSVSASVLQVRAGSTYWSSGGVVAKVSSFKNHEGYNANTMVNDIAVIRLSSSLSFSSSIKAI 135
            ||:....:.|: :.|.|........:..|.....:..::.:|...|:.::||....:.:.::..:
  Rat    69 HCIPGKKSEVI-LGAHSIKKEPEQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLNKNVAIL 132

  Fly   136 SLA----TYNPANGASAAVSGWGTQSSGSSSIPSQ-LQYVNVNIVSQSQCASST-YGYGSQIRNT 194
            .|.    ...|  |....|:|||  ...:.|.||. |:.||:.::.:..|.... |.:...|...
  Rat   133 HLPKKGDDVKP--GTRCHVAGWG--RFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLN 193

  Fly   195 MICAA--ASGKDACQGDSGGPLVSGGVLVGVVSWGY--GCAYSNYPGVYADVAVLR-SWVVSTA 253
            ||||.  ..|||:|.|||||||:..|:..|:.::|.  .|.....||:|..::... .|:..||
  Rat   194 MICAGNLRGGKDSCYGDSGGPLLCEGIFRGITAFGLEGTCGDPKGPGIYTLLSDKHLDWIRKTA 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 61/229 (27%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 61/231 (26%)

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