DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTry and St14

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:248 Identity:83/248 - (33%)
Similarity:120/248 - (48%) Gaps:40/248 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVGGSATTISSFPWQISLQRSG-SHSCGGSIYSANIIVTAAHCLQSVSASVLQVRAGSTYW--- 90
            |:|||:......:|||:||...| .|.||.|:.|.:.:|:||||.|.   ..:...:..|.|   
  Rat   614 RVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDWLVSAAHCFQD---ETIFKYSDHTMWTAF 675

  Fly    91 ---------SSGGVVA-KVSSFKNHEGYNANTMVNDIAVIRLSSSLSFSSSIKAISLATYNPAN- 144
                     |:.||.. |:.....|..:|..|...|||::.|.....:|:.::.|.|    |.| 
  Rat   676 LGLLDQSKRSASGVQEHKLKRIITHPSFNDFTFDYDIALLELEKPAEYSTVVRPICL----PDNT 736

  Fly   145 -----GASAAVSGWG-TQSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRNTMICAA--AS 201
                 |.:..|:||| |:..|:.::  .||...:.:::|:.|...   ...||...|:|..  :.
  Rat   737 HVFPAGKAIWVTGWGHTKEGGTGAL--ILQKGEIRVINQTTCEEL---LPQQITPRMMCVGFLSG 796

  Fly   202 GKDACQGDSGGPLVS----GGVL-VGVVSWGYGCAYSNYPGVYADVAVLRSWV 249
            |.|:|||||||||.|    |.:. .||||||.|||..|.||||..:..:|.|:
  Rat   797 GVDSCQGDSGGPLSSVEKDGRIFQAGVVSWGEGCAQRNKPGVYTRIPEVRDWI 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 82/246 (33%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 82/247 (33%)
Blue background indicates that the domain is not in the aligned region.

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