DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTry and tmprss6

DIOPT Version :10

Sequence 1:NP_476771.1 Gene:alphaTry / 48316 FlyBaseID:FBgn0003863 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:239 Identity:86/239 - (35%)
Similarity:123/239 - (51%) Gaps:22/239 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVGGSATTISSFPWQISLQRSGSHSCGGSIYSANIIVTAAHCL---QSVSASVLQVRAGSTYWS 91
            |:|||:......:|||.|||..|.|.|||::.:...|:|||||.   ...|..|..|..|....|
 Frog   570 RLVGGTQAQEGEWPWQASLQVRGEHICGGTLVADQWILTAAHCFTPESYASPEVWTVYLGKVRLS 634

  Fly    92 SG---GVVAKVSSFKNHEGYNANTMVNDIAVIRLSSSLSFSS-SIKAISL--ATYNPANGASAAV 150
            ..   .:..||.....|..|:.::...|:|::.|...:..:| .::.|.|  :|::...|:|..|
 Frog   635 RSTQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDHLVPLTSPHVQPICLPSSTHHFPTGSSCWV 699

  Fly   151 SGWGT-QSSGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRNTMICAA--ASGKDACQGDSGG 212
            :|||: :.:|.:|  ..||.|::.:|:|..| :..|.|  ||...|:||.  ...|||||||||.
 Frog   700 TGWGSVKENGPTS--DVLQKVDIQLVAQDIC-TELYRY--QISPRMLCAGYRDGSKDACQGDSGS 759

  Fly   213 PLV----SG-GVLVGVVSWGYGCAYSNYPGVYADVAVLRSWVVS 251
            |||    || ....|:||||.||....|.|||:.:..|..|:.|
 Frog   760 PLVCKTASGRWFQAGLVSWGAGCGIPRYFGVYSRITRLVQWIES 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTryNP_476771.1 Tryp_SPc 30..249 CDD:214473 84/235 (36%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 85/237 (36%)
Blue background indicates that the domain is not in the aligned region.

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