Protein Alignment RpII18 and Polr2f

DIOPT Version :9

• Sequence 1: NP_524910.1
• Gene: RpII18 / 48312
• FlyBaseID: FBgn0003275
• Length: 131
• Species: Drosophila melanogaster
• Sequence 2: NP_112625.1
• Gene: Polr2f / 83503
• RGDID: 708567
• Length: 127
• Species: Rattus norvegicus
• Alignment Length: 130
• Identity: 89/130 - (68%)
• Similarity: 103/130 - (79%)
• Gaps: 11/130 - (8%)

  Fly     7 DNDD-VGGDDFDDVDED--VDEDINQEEEA-DNIEIIAPGGAGGGGVPKS--KRITTKYMTKYER 65
            ||:| ..|||||||:||  :|:..|.|||. :|:||:..|..     |::  |||||.|||||||
  Rat     3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGER-----PQANQKRITTPYMTKYER 62

  Fly    66 ARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDHSYEDWSIDELIMVD 130
            ||||||||||||||||:||||:||||||.|||||||.:||||||||||||.|||||.:||||:.|
  Rat    63 ARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIISD 127

  Fly   131  130
              Rat   128  127

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpII18	NP_524910.1	PLN00152	27..130	CDD:177755	75/105 (71%)
Polr2f	NP_112625.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..53		24/54 (44%)
		PLN00152	<26..127	CDD:177755	75/105 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166338151
Domainoid	1	1.000	98	1.000	Domainoid score	I7023
eggNOG	1	0.900	-	-		E1_COG1758
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H7178
Inparanoid	1	1.050	162	1.000	Inparanoid score	I4121
OMA	1	1.010	-	-		QHG59805
OrthoDB	1	1.010	-	-		D1488436at2759
OrthoFinder	1	1.000	-	-		FOG0004261
OrthoInspector	1	1.000	-	-		oto95750
orthoMCL	1	0.900	-	-		OOG6_101231
Panther	1	1.100	-	-	LDO	PTHR10773
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2999
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	16	15.770