Protein Alignment RpII18 and NRPB6B

DIOPT Version :9

• Sequence 1: NP_524910.1
• Gene: RpII18 / 48312
• FlyBaseID: FBgn0003275
• Length: 131
• Species: Drosophila melanogaster
• Sequence 2: NP_178540.1
• Gene: NRPB6B / 815006
• AraportID: AT2G04630
• Length: 144
• Species: Arabidopsis thaliana
• Alignment Length: 136
• Identity: 73/136 - (53%)
• Similarity: 99/136 - (72%)
• Gaps: 5/136 - (3%)

  Fly     1 MDDADYDN-DDVGGDD---FDDVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRITTKYM 60
            |.|.||:. ||:|.:|   ..:::|.|:||.:.:|..| |::.:...........:..|.|:|:|
plant     1 MADDDYNEVDDLGYEDEPAEPEIEEGVEEDADIKENDDVNVDPLETEDKVETEPVQRPRKTSKFM 65

  Fly    61 TKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDHSYEDWSIDE 125
            |||||||:||||||||:|.||:||||:||||||:||||||:|:|||..|||||||.|||:|.:||
plant    66 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDMSYEEWGVDE 130

  Fly   126 LIMVDN 131
            ||:.|:
plant   131 LIVEDS 136

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpII18	NP_524910.1	PLN00152	27..130	CDD:177755	60/103 (58%)
NRPB6B	NP_178540.1	PLN00152	5..135	CDD:177755	70/129 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	89	1.000	Domainoid score	I2692
eggNOG	1	0.900	-	-		E1_COG1758
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H7178
Inparanoid	1	1.050	137	1.000	Inparanoid score	I1817
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1488436at2759
OrthoFinder	1	1.000	-	-		FOG0004261
OrthoInspector	1	1.000	-	-		otm2793
orthoMCL	1	0.900	-	-		OOG6_101231
Panther	1	1.100	-	-	O	PTHR10773
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2999
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	13	12.830