Protein Alignment Polr2F and NRPB6B

DIOPT Version :10

• Sequence 1: NP_524910.1
• Gene: Polr2F / 48312
• FlyBaseID: FBgn0003275
• Length: 131
• Species: Drosophila melanogaster
• Sequence 2: NP_178540.1
• Gene: NRPB6B / 815006
• AraportID: AT2G04630
• Length: 144
• Species: Arabidopsis thaliana
• Alignment Length: 136
• Identity: 73/136 - (53%)
• Similarity: 99/136 - (72%)
• Gaps: 5/136 - (3%)

  Fly     1 MDDADYDN-DDVGGDD---FDDVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRITTKYM 60
            |.|.||:. ||:|.:|   ..:::|.|:||.:.:|..| |::.:...........:..|.|:|:|
plant     1 MADDDYNEVDDLGYEDEPAEPEIEEGVEEDADIKENDDVNVDPLETEDKVETEPVQRPRKTSKFM 65

  Fly    61 TKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDHSYEDWSIDE 125
            |||||||:||||||||:|.||:||||:||||||:||||||:|:|||..|||||||.|||:|.:||
plant    66 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDMSYEEWGVDE 130

  Fly   126 LIMVDN 131
            ||:.|:
plant   131 LIVEDS 136

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2F	NP_524910.1	PLN00152	27..130	CDD:177755	60/103 (58%)
NRPB6B	NP_178540.1	PLN00152	5..135	CDD:177755	70/129 (54%)