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Protein Alignment RpII18 and rpb-6
DIOPT Version :9
Sequence 1: | NP_524910.1 |
Gene: | RpII18 / 48312 |
FlyBaseID: | FBgn0003275 |
Length: | 131 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_496278.1 |
Gene: | rpb-6 / 174630 |
WormBaseID: | WBGene00007355 |
Length: | 137 |
Species: | Caenorhabditis elegans |
Alignment Length: | 138 |
Identity: | 80/138 - (57%) |
Similarity: | 101/138 - (73%) |
Gaps: | 13/138 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DDADY---DNDD-VGGDDFDDV-DEDVDEDINQEEEADNI----EIIAPGGAGGGGVPKSKRITT 57
|:.|| |||| |..::.:|| :||.....|::|:.||: |:...|.| ||.|:.:||
Worm 3 DEDDYQDMDNDDFVDDNEMEDVIEEDPQRPDNEDEDDDNVDENFELFDQGKA----VPTSEHVTT 63
Fly 58 KYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDHSYEDWS 122
.:|||||||||||||||||||.||:||||:||||||:||.|||||::||||:||||||.|||||.
Worm 64 PFMTKYERARVLGTRALQIAMGAPVMVELEGETDPLEIARKELKQRRIPIIVRRYLPDGSYEDWP 128
Fly 123 IDELIMVD 130
.|:|.:.|
Worm 129 TDQLQLAD 136
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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