DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and RIM15

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_116620.1 Gene:RIM15 / 850511 SGDID:S000001861 Length:1770 Species:Saccharomyces cerevisiae


Alignment Length:739 Identity:150/739 - (20%)
Similarity:238/739 - (32%) Gaps:318/739 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 MDPNGL-SDPYVKVKLIPD---------DKDQSKK------------------------------ 228
            :|.||| ||.|:...:||:         |:|.:..                              
Yeast   560 LDSNGLFSDAYLNADIIPNPSIESTISIDRDNNTNSRGSSMKQYGIGEATDSRTSNSERPSSSSS 624

  Fly   229 ----KTRTI----KACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRNDFMGALSFGISEII 285
                ::|:|    |...:.|.|:..|.::...|||........|...||...   |.:.|.....
Yeast   625 RLGIRSRSITPRQKIEYSHVDNDDRTNEMLSRDKDSLQPQPSVDTTITSSTQ---ATTTGTKTNS 686

  Fly   286 KNPTNGWF-KLLT-------QDEGEYYNVPCADDEQ---------------------DLLKLKQK 321
            .|.||... ||:|       :....:.|:.....:|                     |.|..:|.
Yeast   687 NNSTNSVLPKLMTSISLTPRRGSPSFGNLASHSMQQTNSFKLIHDKSPISSPFTFSKDFLTPEQH 751

  Fly   322 PSQKKPMVMRSD--------------------TNTHTSSKKDMIRATDFNFIKVLGKGSFGKVLL 366
            ||.    :.|:|                    ||....|....|:  |::.:|.:.||::|.|.|
Yeast   752 PSN----IARTDSINNAMLTSPNMPLSPLLLATNQTVKSPTPSIK--DYDILKPISKGAYGSVYL 810

  Fly   367 AERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYV 431
            |.:|.:.:.:|||:|:|..:|..:.|.....|:.::.:....|::.:|.:.||..|.||.||||:
Yeast   811 ARKKLTGDYFAIKVLRKSDMIAKNQVTNVKSERAIMMVQSDKPYVARLFASFQNKDNLFLVMEYL 875

  Fly   432 NGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDLKLDNVLLDADGHVKIADFGMC 496
            .||||...|:..|...:..|..|..||..|:..:|..||::.|||.:|:|:|..||||:.|||:.
Yeast   876 PGGDLATLIKMMGYLPDQWAKQYLTEIVVGVNDMHQNGIIHHDLKPENLLIDNAGHVKLTDFGLS 940

  Fly   497 KENIV------------------------------------------------------------ 501
            :..::                                                            
Yeast   941 RAGLIRRHKFVPHKSSLSISSTLPIDNPANNFTMNNNNSNHSQLSTPDSFTSDHKQYNRSKKSSL 1005

  Fly   502 ----------------------------------------------------------------- 501
                                                                             
Yeast  1006 GQQYEHSEYSSTSNSHSMTPTPSTNTVVYPSYYRGKDRSHGSSNIDLPASLRRSESQLSFSLLDI 1070

  Fly   502 ----------------------------------------------------------------- 501
                                                                             
Yeast  1071 SRSSTPPLANPTNSNANNIMRRKSLTENKSFSNDLLSSDAIAATNTNINSNNNISLSPAPSDLAL 1135

  Fly   502 ----GDKTTKTFCGTPDYIAPEIILYQPYG---KSVDWWAYGVLLYEMLVGQPPFDGEDEEELFA 559
                ..|..|.|.|||||:|||.|  :..|   |..|||:.|.:.:|:|:|.|||..|..:.:|.
Yeast  1136 FYPDDSKQNKKFFGTPDYLAPETI--EGKGEDNKQCDWWSVGCIFFELLLGYPPFHAETPDAVFK 1198

  Fly   560 AITDHNVSYP---------KSLSKEAKEACKGFLTKQPNKRLGCGSSGEEDVRLHPFFRRIDWEK 615
            .|....:.:|         :.|:.|||:..:..|...|.|||  |:.|.::::.||:|:.:||:.
Yeast  1199 KILSGVIQWPEFKNEEEEREFLTPEAKDLIEKLLVVDPAKRL--GAKGIQEIKDHPYFKNVDWDH 1261

  Fly   616 IENREVQPPFKPKIKHRKDVSNFD 639
            :.:.|..  |.|.|.:.:|...||
Yeast  1262 VYDEEAS--FVPTIDNPEDTDYFD 1283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386
C2_PKC_alpha_gamma 177..307 CDD:175992 32/158 (20%)
STKc_cPKC 353..672 CDD:270739 105/493 (21%)
RIM15NP_116620.1 Protein Kinases, catalytic domain 797..1260 CDD:473864 97/466 (21%)
S_TK_X 1255..>1298 CDD:214529 9/31 (29%)
REC_hyHK_CKI1_RcsC-like 1637..1746 CDD:381099
Blue background indicates that the domain is not in the aligned region.

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