DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and C2

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_188425.2 Gene:C2 / 821323 AraportID:AT3G17980 Length:177 Species:Arabidopsis thaliana


Alignment Length:97 Identity:40/97 - (41%)
Similarity:53/97 - (54%) Gaps:8/97 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 LLTVQIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDK 254
            ||.::||.|.||...|.:. |||||.||:     .:.|.|||.|...:||.|||.||  |...|.
plant    19 LLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLT--LSVTDS 75

  Fly   255 DRRILIEVWDWDRTSRNDFMGALSFGISEIIK 286
            :..:|:.|:|.|..|::|.||...|.|...|:
plant    76 NLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIE 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386
C2_PKC_alpha_gamma 177..307 CDD:175992 40/97 (41%)
STKc_cPKC 353..672 CDD:270739
C2NP_188425.2 C2_ArfGAP 17..160 CDD:176003 40/97 (41%)
Blue background indicates that the domain is not in the aligned region.

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