DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and Prkch

DIOPT Version :9

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_112347.1 Gene:Prkch / 81749 RGDID:621888 Length:683 Species:Rattus norvegicus


Alignment Length:656 Identity:282/656 - (42%)
Similarity:365/656 - (55%) Gaps:139/656 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGFGKQGFQCQVCSYVV 92
            :|.|:.|:::: |..|..|.|:|.:.:|||:||||::||        |..|||||:|||||:.||
  Rat   155 TRKRQRAMRRR-VHQVNGHKFMATYLRQPTYCSHCREFI--------WGVFGKQGYQCQVCTCVV 210

  Fly    93 HKRCHEYVTFICPGKD--KGIDSDSPKTQ------HNFEPFTYAGPTFCDHCGSLLYGIYHQGLK 149
            |||||..:...|..::  ..:|:...:.:      |.|....|..|||||||||||:||..|||:
  Rat   211 HKRCHHLIVTACTCQNNINKVDAKIAEQRFGINIPHKFNVHNYKVPTFCDHCGSLLWGIMRQGLQ 275

  Fly   150 CSACDMNVHARCKENVPSLCGCDHTERRGRIYLEINVKENLLTVQIKEGRNLIPMDPNGLSDPYV 214
            |..|.||||.||:.||...||             :|..|...|:   .|..|.|           
  Rat   276 CKICKMNVHIRCQANVAPNCG-------------VNAVELAKTL---AGMGLQP----------- 313

  Fly   215 KVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRNDFMGALSF 279
                                                                        |.:| 
  Rat   314 ------------------------------------------------------------GNIS- 317

  Fly   280 GISEIIKNPTNGWFKLLTQDEGEYYNVPCADDEQDLLKLKQKPSQKKPMVMRSDTNTHTSSKKDM 344
                    ||:   ||::               :..|:.:.|...|:    .:....::||:   
  Rat   318 --------PTS---KLIS---------------RSTLRRQGKEGSKE----GNGIGVNSSSR--- 349

  Fly   345 IRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPP 409
            ....:|.||:||||||||||:||..|.:.||||:|:||||||:|||||||||.|||:|:|....|
  Rat   350 FGIDNFEFIRVLGKGSFGKVMLARIKETGELYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 414

  Fly   410 FLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRD 474
            ||.||..||||.||||||||:||||||||.||:..:|.|..|.||||||.:.|.|||.|||:|||
  Rat   415 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHEKGIIYRD 479

  Fly   475 LKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLL 539
            |||||||||.:||.|:||||||||.|....||.|||||||||||||:....||.:|||||.||||
  Rat   480 LKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLL 544

  Fly   540 YEMLVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNKRLG-CGSSGEEDVR 603
            ||||.|..||:.|:|::||.||.:..|.||..|.::|....|.|:||.|..||| ....||.::.
  Rat   545 YEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHEIL 609

  Fly   604 LHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLTPTDKVFMMNLDQSEFVGF 668
            .||||:.|||.::.:|:::|||:|:||.|:||||||..|..|:..|||.|:..:..::|.||..|
  Rat   610 RHPFFKEIDWVQLNHRQLEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNF 674

  Fly   669 SYMNPE 674
            ||::||
  Rat   675 SYVSPE 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 31/67 (46%)
C1_cPKC_rpt2 120..173 CDD:410386 31/52 (60%)
C2_PKC_alpha_gamma 177..307 CDD:175992 12/129 (9%)
STKc_cPKC 353..672 CDD:270739 193/319 (61%)
PrkchNP_112347.1 C2_PKC_epsilon 8..140 CDD:175981
C1_1 172..225 CDD:278556 31/60 (52%)
C1_1 246..298 CDD:278556 31/64 (48%)
S_TKc 355..614 CDD:214567 164/258 (64%)
STKc_nPKC_eta 359..681 CDD:270742 194/322 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343113
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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