DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc53E and pkn1a

DIOPT Version :9

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_005160107.3 Gene:pkn1a / 560840 ZFINID:ZDB-GENE-061207-17 Length:967 Species:Danio rerio


Alignment Length:369 Identity:178/369 - (48%)
Similarity:238/369 - (64%) Gaps:13/369 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 DLLKLKQKPSQKKPMV---MRSDTNTHTSS---KKDMIRATDFNFIKVLGKGSFGKVLLAERKGS 372
            |:...:::|| .:|:.   :.:...||:.|   ||..:...||..|.|||:|.||||||||.|.|
Zfish   599 DISTPERQPS-TEPLSAPDVTTPIRTHSLSSKQKKTSLSLQDFRLIAVLGRGHFGKVLLAEYKKS 662

  Fly   373 EELYAIKILKKDVIIQDDDVECTMIEKRVLAL--GEKPPFLVQLHSCFQTMDRLFFVMEYVNGGD 435
            ..:||||.|||..|:..|:||..|.|||:...  |.:.||||.|.:||||.:.:.|||||..|||
Zfish   663 GSMYAIKALKKGDIVARDEVESLMCEKRIFEAVNGAQHPFLVNLFACFQTPEHVCFVMEYTAGGD 727

  Fly   436 LMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDLKLDNVLLDADGHVKIADFGMCKENI 500
            ||..|.. ..|.||.||||:|.:..||.|||...|:||||||||:|||.:|:|||||||:|||.:
Zfish   728 LMMHIHA-DVFTEPRAVFYSACVVLGLQFLHDNKIVYRDLKLDNLLLDTEGYVKIADFGLCKEGM 791

  Fly   501 -VGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDH 564
             .||:|: ||||||:::|||::....|.::||||..|||:||||||:.||.|:||||:|.:|.:.
Zfish   792 GFGDRTS-TFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND 855

  Fly   565 NVSYPKSLSKEAKEACKGFLTKQPNKRLGCGSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKI 629
            .|.||:.||.||....:..|.:.|.:|||......|||:..||||.:|||.:..|::.|||.|.|
Zfish   856 EVRYPRFLSAEAIGIMRRLLRRNPERRLGSSEKDAEDVKKQPFFRNMDWEALLLRKLPPPFIPSI 920

  Fly   630 KHRKDVSNFDKQFTSEKTDLT-PTDKVFMMNLDQSEFVGFSYMN 672
            ..::||||||::||:|...|| |.:...:...||..|..|.|::
Zfish   921 GGKEDVSNFDEEFTTEAPTLTPPREPRVLSRKDQDSFRDFDYVS 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386
C2_PKC_alpha_gamma 177..307 CDD:175992
STKc_cPKC 353..672 CDD:270739 167/322 (52%)
pkn1aXP_005160107.3 HR1_PKN_1 71..136 CDD:212012
HR1_PKN1_2 156..233 CDD:212020
HR1 237..310 CDD:320753
C2 421..508 CDD:326325
STKc_PKN 640..965 CDD:270741 168/327 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583319
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.870

Return to query results.
Submit another query.