DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and prkchb

DIOPT Version :9

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001038271.1 Gene:prkchb / 556591 ZFINID:ZDB-GENE-041001-104 Length:676 Species:Danio rerio


Alignment Length:669 Identity:278/669 - (41%)
Similarity:353/669 - (52%) Gaps:142/669 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EGEAVGENKM-KSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGFGK 80
            :.|||...|. |..:||..||::.|..:..|.|:|.|..|||||.|||:||        |...||
Zfish   135 DDEAVNIVKTHKEFVRKKVLKRRKVHQIYGHKFMATFLPQPTFCYHCKNFI--------WGVIGK 191

  Fly    81 QGFQCQVCSYVVHKRCHEYVTFICP--------GKDKGIDSDSPKTQHNFEPFTYAGPTFCDHCG 137
            ||:|||||:.|||||||..|...||        |:.:|...:.|   |.|:...|..||:|:|||
Zfish   192 QGYQCQVCTCVVHKRCHALVVTECPRMRKDANEGQRQGFSINLP---HQFKEHNYKVPTYCNHCG 253

  Fly   138 SLLYGIYHQGLKCSACDMNVHARCKENVPSLCGCDHTERRGRIYLEINVKENLLTVQIKEGRNLI 202
            |||||:..|||.|..|.||:|.||::||...||.|:.|...:: .||.:   |.|:..::.:..:
Zfish   254 SLLYGLVKQGLHCKICKMNIHKRCEQNVAPNCGVDNAELASKL-SEIGL---LNTISKRKSQGSL 314

  Fly   203 PMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDR 267
            .|...........::...::.|:     ..:|.||.                             
Zfish   315 HMSSVRSQSSTTSIETTEEESDE-----EAVKVCLE----------------------------- 345

  Fly   268 TSRNDFMGALSFGISEIIKNPTNGWFKLLTQDEGEYYNVPCADDEQDLLKLKQKPSQKKPMVMRS 332
                                                                             
Zfish   346 ----------------------------------------------------------------- 345

  Fly   333 DTNTHTSSKKDMIRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMI 397
                            ||:|::||||||||||:||..|....::|:|:||||||:|:||||.||.
Zfish   346 ----------------DFSFLQVLGKGSFGKVMLARLKSDHRVFAVKMLKKDVILQEDDVEATMT 394

  Fly   398 EKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGL 462
            |||||.|..:.|||.||:.||||.:|||||||:||||||||.||:..:|.||.|.|||||:.:.|
Zfish   395 EKRVLTLAHQHPFLTQLYYCFQTTERLFFVMEFVNGGDLMFHIQKCRRFDEPRAQFYAAEVTSAL 459

  Fly   463 FFLHTKGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYG 527
            .|||:|||:||||||||:|||.|||.|:||||||||.|...|.|.|||||||||||||:..:.||
Zfish   460 KFLHSKGIIYRDLKLDNILLDRDGHCKLADFGMCKEEIFNGKLTSTFCGTPDYIAPEILQEELYG 524

  Fly   528 KSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNKRL 592
            .||||||.||||||||.|..||:.|.|:|||..|....:.|...||.||::..||.||:.|..||
Zfish   525 VSVDWWALGVLLYEMLSGHAPFEAETEDELFECILKDEIIYSSWLSYEAEDILKGLLTRDPACRL 589

  Fly   593 GC--GSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLTPTDKV 655
            ||  ...|||.:..|.||..:||||:..||:.|||.|:|...:||:|||..||.|...|||.:: 
Zfish   590 GCIDNDGGEEAITAHAFFTGLDWEKLYRREITPPFTPRINSIEDVNNFDPDFTQEDPCLTPIEE- 653

  Fly   656 FMMNLDQSEFVGFSYMNPE 674
            .:....|..|..|||:.||
Zfish   654 SLFPFHQDGFKDFSYIAPE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 35/73 (48%)
C1_cPKC_rpt2 120..173 CDD:410386 28/52 (54%)
C2_PKC_alpha_gamma 177..307 CDD:175992 9/129 (7%)
STKc_cPKC 353..672 CDD:270739 187/320 (58%)
prkchbNP_001038271.1 C2_PKC_epsilon 3..133 CDD:175981
C1_1 165..216 CDD:278556 32/58 (55%)
C1_1 236..288 CDD:278556 28/51 (55%)
S_TKc 347..607 CDD:214567 160/259 (62%)
PKc_like 351..673 CDD:304357 189/323 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583316
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51944
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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