DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and prkci

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001012707.1 Gene:prkci / 503517 XenbaseID:XB-GENE-481945 Length:588 Species:Xenopus tropicalis


Alignment Length:673 Identity:223/673 - (33%)
Similarity:308/673 - (45%) Gaps:206/673 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PQQQGAEGEAVGENKMKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAW 75
            |::.|.  ...||:  ||..|:||.:.:.::....|.|.|:.|.:...|:.|.|.|        |
 Frog   103 PERPGM--PCAGED--KSIYRRGARRWRKLYCANGHTFQAKRFNRRAHCAICTDRI--------W 155

  Fly    76 MGFGKQGFQCQVCSYVVHKRCHEYVTFICPGKDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLL 140
             |.|:||::|..|..:|||:||:.|:..| |:                 .|.|.|          
 Frog   156 -GLGRQGYKCINCKLLVHKKCHKLVSIEC-GR-----------------HTIAEP---------- 191

  Fly   141 YGIYHQGLKCSACDMNVHARCKENVPSLCGCDHTERRGRIYLEINVKENLLTVQIKEGRNLIPMD 205
                                                                        :||||
 Frog   192 ------------------------------------------------------------VIPMD 196

  Fly   206 PNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSR 270
            |.|:            ..|.|:               ..|.|  :|..:|               
 Frog   197 PPGM------------HSDHSE---------------PXLPY--RPRSQD--------------- 217

  Fly   271 NDFMGALSFGISEIIKNPTNGWFKLLTQDEGEYYNVPCADDEQDLLKLKQKPSQKKPMVMRSDTN 335
                                                          .|.|...:|:.|..|....
 Frog   218 ----------------------------------------------NLDQVGEEKEAMNSRESGK 236

  Fly   336 THTSSKKDMIRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKR 400
            |.:|     :...||:.::|:|:||:.||||...|.:|.:||:|::||:::..|:|::....||.
 Frog   237 TPSS-----LGLQDFDLMRVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKH 296

  Fly   401 VLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFL 465
            |.......||||.|||||||..|||||:||||||||||.:|:..|..|..|.||:|||:..|.:|
 Frog   297 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 361

  Fly   466 HTKGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSV 530
            |.:||:||||||||||||::||:|:.|:|||||.:....||.||||||:||||||:..:.||.||
 Frog   362 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 426

  Fly   531 DWWAYGVLLYEMLVGQPPF---------DGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTK 586
            ||||.|||::||:.|:.||         |...|:.||..|.:..:..|:|||.:|....|.||.|
 Frog   427 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDFLFQVILEKQIRIPRSLSVKAASVLKSFLNK 491

  Fly   587 QPNKRLGC-GSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLT 650
            .|..|||| ..:|..|::.|.|||.:||:.:|.::|.|||||.|.....:.|||.|||:|...||
 Frog   492 DPKDRLGCHPQTGFADIQGHQFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPVQLT 556

  Fly   651 PTDKVFMMNLDQSEFVGFSYMNP 673
            |.|:..:..:|||||.||.|:||
 Frog   557 PDDEDVVRKIDQSEFEGFEYINP 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 23/65 (35%)
C1_cPKC_rpt2 120..173 CDD:410386 3/52 (6%)
C2_PKC_alpha_gamma 177..307 CDD:175992 12/129 (9%)
STKc_cPKC 353..672 CDD:270739 165/328 (50%)
prkciNP_001012707.1 PB1_aPKC 19..101 CDD:99725
C1_aPKC 132..186 CDD:410344 23/80 (29%)
STKc_aPKC_iota 225..588 CDD:270769 174/360 (48%)
Blue background indicates that the domain is not in the aligned region.

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