DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc53E and for

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_477487.1 Gene:for / 44817 FlyBaseID:FBgn0000721 Length:1088 Species:Drosophila melanogaster


Alignment Length:455 Identity:133/455 - (29%)
Similarity:206/455 - (45%) Gaps:69/455 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 SKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRNDFMGALSFGISEIIKNPTN 290
            ||.|.|.           |:......|:|..|:|         .:.||.|.              
  Fly   679 SKGKVRV-----------TIKQQDTQEEKFIRML---------GKGDFFGE-------------- 709

  Fly   291 GWFKLLTQDEGEYYNVPCADDE----------------QDLLKLKQKPSQKKPMVMRSDTNTHTS 339
               |.|..|:....|:.|...:                .:|.::|.:...:..|..|........
  Fly   710 ---KALQGDDLRTANIICESADGVSCLVIDRETFNQLISNLDEIKHRYDDEGAMERRKINEEFRD 771

  Fly   340 SKKDMIRATDFNFIKVLGKGSFGKVLLAERKG-SEELYAIKILKKDVIIQDDDVECTMIEKRVLA 403
                 |..||...|..||.|.||:|.|.:..| |...:|:|.:||..|::....:..|.||.:  
  Fly   772 -----INLTDLRVIATLGVGGFGRVELVQTNGDSSRSFALKQMKKSQIVETRQQQHIMSEKEI-- 829

  Fly   404 LGE-KPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHT 467
            :|| ...|:|:|...|:....|:.:||...||:|...::..|.|.:....||.|.:.....:||:
  Fly   830 MGEANCQFIVKLFKTFKDKKYLYMLMESCLGGELWTILRDKGNFDDSTTRFYTACVVEAFDYLHS 894

  Fly   468 KGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDW 532
            :.|:|||||.:|:||:..|:||:.|||..|:...|.||. ||||||:|:|||:||.:.:..|.|:
  Fly   895 RNIIYRDLKPENLLLNERGYVKLVDFGFAKKLQTGRKTW-TFCGTPEYVAPEVILNRGHDISADY 958

  Fly   533 WAYGVLLYEMLVGQPPFDGEDEEELFAAITD--HNVSYPKSLSKEAKEACKGFLTKQPNKRLGCG 595
            |:.|||::|:|.|.|||.|.|....:..|..  ..:.:|:::::.|....|......|.:|||..
  Fly   959 WSLGVLMFELLTGTPPFTGSDPMRTYNIILKGIDAIEFPRNITRNASNLIKKLCRDNPAERLGYQ 1023

  Fly   596 SSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEK----TDLTPTDKVF 656
            ..|..:::.|.:|....|..::|..::||.||.:|...|.:|||......:    .|:|..||.|
  Fly  1024 RGGISEIQKHKWFDGFYWWGLQNCTLEPPIKPAVKSVVDTTNFDDYPPDPEGPPPDDVTGWDKDF 1088

  Fly   657  656
              Fly  1089  1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386
C2_PKC_alpha_gamma 177..307 CDD:175992 16/80 (20%)
STKc_cPKC 353..672 CDD:270739 109/312 (35%)
forNP_477487.1 DD_cGKI-alpha 385..432 CDD:213374
CAP_ED 520..629 CDD:237999
CAP_ED 638..754 CDD:237999 19/111 (17%)
STKc_cGK 783..1043 CDD:270724 93/262 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.