DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and Rps6ka4

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001101987.2 Gene:Rps6ka4 / 361715 RGDID:1307277 Length:773 Species:Rattus norvegicus


Alignment Length:354 Identity:134/354 - (37%)
Similarity:205/354 - (57%) Gaps:12/354 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 TNTHTSSKKDMIRATDFNFIKVLGKGSFGKVLLAERKGSEE---LYAIKILKKDVIIQDDDV-EC 394
            |..:.:..::.:...:|..:||||.|::|||.|..:.|..:   |||:|:|:|..::|.... |.
  Rat    17 TEANLTGHEEKVSVENFALLKVLGTGAYGKVFLVRKAGGHDAGKLYAMKVLRKAALVQRAKTQEH 81

  Fly   395 TMIEKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIA 459
            |..|:.||.|..:.||||.||..|||..:|..:::||:||::...:.|...|||.....|..||.
  Rat    82 TRTERSVLELVRQAPFLVTLHYAFQTDAKLHLILDYVSGGEMFTHLYQRQYFKEAEVRVYGGEIV 146

  Fly   460 AGLFFLHTKGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDK-TTKTFCGTPDYIAPEIILY 523
            ..|..||..||:||||||:|||||::||:.:.|||:.||.:..:| .|.:||||.:|:|||||..
  Rat   147 LALEHLHKLGIIYRDLKLENVLLDSEGHIVLTDFGLSKEFLTEEKERTFSFCGTIEYMAPEIIRS 211

  Fly   524 QP-YGKSVDWWAYGVLLYEMLVGQPPFDGEDEE----ELFAAITDHNVSYPKSLSKEAKEACKGF 583
            :. :||:||||:.|:||:|:|.|..||..|.|.    |:...|...:..:|..:...|::..:..
  Rat   212 KAGHGKAVDWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPPRIGPVAQDLLQRL 276

  Fly   584 LTKQPNKRLGCGSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTD 648
            |.|.|.||||.|..|.::|:.|.||:.:||..:..|::..||:|:|:...||.||.::||..:..
  Rat   277 LCKDPKKRLGAGPQGAQEVKSHLFFQGLDWVALAARKIPAPFRPQIRSELDVGNFAEEFTRLEPV 341

  Fly   649 LTPTDKVFMMNLDQSEFVGFSYMNPEYVF 677
            .:|...  ....|...|.|:|::.|..:|
  Rat   342 YSPAGS--PPPGDPRIFQGYSFVAPSILF 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386
C2_PKC_alpha_gamma 177..307 CDD:175992
STKc_cPKC 353..672 CDD:270739 130/328 (40%)
Rps6ka4NP_001101987.2 STKc_MSK2_N 32..364 CDD:270765 131/333 (39%)
Protein Kinases, catalytic domain 404..714 CDD:473864
Blue background indicates that the domain is not in the aligned region.

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