DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and Vav

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001097030.1 Gene:Vav / 32920 FlyBaseID:FBgn0040068 Length:1001 Species:Drosophila melanogaster


Alignment Length:63 Identity:24/63 - (38%)
Similarity:31/63 - (49%) Gaps:11/63 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 TQHNFEPFTYAGPTFCDHCGSLLYGIYHQGLKCSACDMNVH-------ARCKEN----VPSLC 169
            |.|..|.:|:..||.|.||...|.|..|||.:|..|.::||       .|||:|    .|.:|
  Fly   759 TDHKMEIYTFDAPTTCRHCSKFLKGRIHQGYRCKVCQISVHKGCISSTGRCKQNPVSVPPPVC 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386 23/61 (38%)
C2_PKC_alpha_gamma 177..307 CDD:175992
STKc_cPKC 353..672 CDD:270739
VavNP_001097030.1 CH_VAV 19..135 CDD:409050
RhoGEF 428..602 CDD:459876
PH_Vav 624..753 CDD:269930
C1_VAV 759..810 CDD:410360 19/50 (38%)
SH2_Vav_family 824..934 CDD:198193
SH3 940..993 CDD:473055
Blue background indicates that the domain is not in the aligned region.

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