DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and Pkcdelta

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster


Alignment Length:606 Identity:232/606 - (38%)
Similarity:310/606 - (51%) Gaps:99/606 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 CDMNVHARCKENVPSLC-----------------GCDHTERRGRIYLEINVKENLLTVQIKEGRN 200
            |..:|.|...:.:||..                 ..|::...|...|..::|:.|...:.|:...
  Fly  1298 CLRDVDAELDDYIPSSAENSQEDDDDDDDGSGSSSDDYSSVDGCANLSASMKKKLRKEKKKQKAK 1362

  Fly   201 LIPMDPNGLSDPYVKVKLIPDDKDQSKKKT--RTIKACLNPVW-NETLTYDLK------------ 250
            ..........||:.|:|:...:|...|::.  ..:.|...|:| .|.:.|..:            
  Fly  1363 AAAAAEAKRFDPHKKIKIDTTNKCYVKEEAPRYPLVATPRPLWKREKIVYSDENTDDESGSEEGS 1427

  Fly   251 ----PEDKDRRILIEVWDWDRTSRNDFMGALSFGISE-------IIKNPTNGWFKLLTQDEGEYY 304
                .||.|          |.:...:.....|...||       :.|..::....:|........
  Fly  1428 GGSLDEDSD----------DESGGEECSSTSSSASSEDLDAVAMVTKAGSSNATTVLDSSNSSGS 1482

  Fly   305 N-----VPCADDEQDLLKLKQKPSQKKPMVMRSDT---------NTHTSSKKDMIRAT------- 348
            |     ||.|.....    ....:...|.::|..|         .|..||.|.|:..:       
  Fly  1483 NAGTLSVPSAGSGSG----GGASTSSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQFQ 1543

  Fly   349 ---------------------DFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDV 392
                                 ||:|:.||||||||||||||.:.:...||||.|||||:::||||
  Fly  1544 KSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDV 1608

  Fly   393 ECTMIEKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAE 457
            :.|:||::|||||.|.|:|..|...|||...|||||||:|||||||.||:.|:|.|..|.||.||
  Fly  1609 DSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAE 1673

  Fly   458 IAAGLFFLHTKGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIIL 522
            |.:||.|||.|||:||||||||||||.:|||:||||||||..|..|||..:|||||||:|||||.
  Fly  1674 IISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIK 1738

  Fly   523 YQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQ 587
            .:.|.::||||::||||||||:||.||.|.||:|||.:|.:....:|..:|.||....||.|.|.
  Fly  1739 GEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKD 1803

  Fly   588 PNKRLGCGSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLTPT 652
            ..||:|...|...|:..|.|||.|||..:|.|:::|||||::||..|...||:.||.|:..|||.
  Fly  1804 YTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPI 1868

  Fly   653 DKVFMMNLDQSEFVGFSYMNP 673
            ||..:.::||.:|.||:|.||
  Fly  1869 DKEILASMDQKQFHGFTYTNP 1889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383
C1_cPKC_rpt2 120..173 CDD:410386 5/36 (14%)
C2_PKC_alpha_gamma 177..307 CDD:175992 26/160 (16%)
STKc_cPKC 353..672 CDD:270739 184/318 (58%)
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 184/318 (58%)
Blue background indicates that the domain is not in the aligned region.

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