DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc53E and Prkca

DIOPT Version :9

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_038941139.1 Gene:Prkca / 24680 RGDID:3395 Length:722 Species:Rattus norvegicus


Alignment Length:703 Identity:451/703 - (64%)
Similarity:541/703 - (76%) Gaps:67/703 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGFGKQGFQCQVCSYVVHKR 95
            |||||::|||..||||.|||||||||||||||.|||        | ||||||||||||.:|||||
  Rat    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFI--------W-GFGKQGFQCQVCCFVVHKR 77

  Fly    96 CHEYVTFICPGKDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLLYGIYHQGLKCSACDMNVHAR 160
            |||:|||.|||.|||.|:|.|:::|.|:..||..|||||||||||||:.|||:||..||||||.:
  Rat    78 CHEFVTFSCPGADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQ 142

  Fly   161 CKENVPSLCGCDHTERRGRIYLEINVKENLLTVQIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQ 225
            |..|||||||.||||:||||||:..|.:..|.|.:::.:||||||||||||||||:|||||.|::
  Rat   143 CVINVPSLCGMDHTEKRGRIYLKAEVTDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNE 207

  Fly   226 SKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRNDFMGALSFGISEIIKNPTN 290
            ||:||:||::.|||.|||:.|:.|||.|||||:.:|:||||||:||||||:||||:||::|.|.:
  Rat   208 SKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPAS 272

  Fly   291 GWFKLLTQDEGEYYNVPCAD-DEQDLLKLKQK-------PSQKKPMVMRSDTNTHTSSKKDMIRA 347
            ||:|||.|:||||||||..: ||:..::|:||       |:..| ::..|:.....|:..|.::.
  Rat   273 GWYKLLNQEEGEYYNVPIPEGDEEGNVELRQKFEKAKLGPAGNK-VISPSEDRKQPSNNLDRVKL 336

  Fly   348 TDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPFLV 412
            |||||:.||||||||||:||:|||:|||||||||||||:||||||||||:|||||||.:|||||.
  Rat   337 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 401

  Fly   413 QLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDLKL 477
            ||||||||:|||:||||||||||||:.|||.||||||.||||||||:.||||||.:||:||||||
  Rat   402 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKL 466

  Fly   478 DNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEM 542
            |||:||::||:||||||||||:::...||:||||||||||||||.||||||||||||||||||||
  Rat   467 DNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 531

  Fly   543 LVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNKRLGCGSSGEEDVRLHPF 607
            |.||||||||||:|||.:|.:|||||||||||||...|||.:||.|.||||||..||.|||.|.|
  Rat   532 LAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAF 596

  Fly   608 FRRIDWEKIENREVQPPFKPKIKHRKDV------------------------------------- 635
            ||||||||:||||:|||||||::...:|                                     
  Rat   597 FRRIDWEKLENREIQPPFKPKVQCTAEVRGFTAFSTQLFLILDISNSSPLSVLILQNFCTKMHWL 661

  Fly   636 ------------SNFDKQFTSEKTDLTPTDKVFMMNLDQSEFVGFSYMNPEYV 676
                        .||||.||..:..|||.|::.:.|:|||:|.||||:||::|
  Rat   662 QWASRPSCGKGAENFDKFFTRGQPVLTPPDQLVIANIDQSDFEGFSYVNPQFV 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 49/65 (75%)
C1_cPKC_rpt2 120..173 CDD:410386 36/52 (69%)
C2_PKC_alpha_gamma 177..307 CDD:175992 85/129 (66%)
STKc_cPKC 353..672 CDD:270739 243/367 (66%)
PrkcaXP_038941139.1 C1_cPKC_rpt1 35..92 CDD:410383 49/65 (75%)
C1_cPKC_rpt2 102..155 CDD:410386 36/52 (69%)
C2_PKC_alpha_gamma 159..289 CDD:175992 85/129 (66%)
PKc_like 328..718 CDD:419665 253/387 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343105
Domainoid 1 1.000 423 1.000 Domainoid score I604
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55679
Inparanoid 1 1.050 965 1.000 Inparanoid score I308
OMA 1 1.010 - - QHG51944
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 1 1.000 - - otm46366
orthoMCL 1 0.900 - - OOG6_103255
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.910

Return to query results.
Submit another query.