DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and R12G8.1

DIOPT Version :10

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_507486.1 Gene:R12G8.1 / 187844 WormBaseID:WBGene00011254 Length:164 Species:Caenorhabditis elegans


Alignment Length:149 Identity:57/149 - (38%)
Similarity:73/149 - (48%) Gaps:27/149 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGFGKQGFQCQVCSYVVHKRCHEYVTFIC 104
            :..:..|.|.|....||||||.|..||         .|.||||::|..|..|||||||..:|..|
 Worm    21 IHEISGHKFKAVGLAQPTFCSFCSKFI---------YGVGKQGYKCLGCETVVHKRCHALITARC 76

  Fly   105 ----------PG--------KDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLLYGIYHQGLKCS 151
                      |.        :.:....:.|...|:|....:..|||||||||:|||:..||::|:
 Worm    77 TFGPSSRAPVPAETTNLKTRRSRSASEEPPSNTHHFNKHFFTRPTFCDHCGSMLYGLTKQGVQCT 141

  Fly   152 ACDMNVHARCKENVPSLCG 170
            .|..|||.||:|.|...||
 Worm   142 DCHANVHFRCQEKVLRNCG 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 29/83 (35%)
C1_cPKC_rpt2 120..173 CDD:410386 27/51 (53%)
C2_PKC_alpha_gamma 177..307 CDD:175992
STKc_cPKC 353..672 CDD:270739
R12G8.1NP_507486.1 C1_cPKC_nPKC_rpt1 26..77 CDD:410342 27/59 (46%)
C1 110..161 CDD:412127 27/51 (53%)
Blue background indicates that the domain is not in the aligned region.

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