DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkc53E and Prkca

DIOPT Version :9

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_036012317.1 Gene:Prkca / 18750 MGIID:97595 Length:688 Species:Mus musculus


Alignment Length:669 Identity:451/669 - (67%)
Similarity:539/669 - (80%) Gaps:33/669 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGFGKQGFQCQVCSYVVHKR 95
            |||||::|||..||||.|||||||||||||||.|||        | ||||||||||||.:|||||
Mouse    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFI--------W-GFGKQGFQCQVCCFVVHKR 77

  Fly    96 CHEYVTFICPGKDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLLYGIYHQGLKCSACDMNVHAR 160
            |||:|||.|||.|||.|:|.|:::|.|:..||..|||||||||||||:.|||:||..||||||.:
Mouse    78 CHEFVTFSCPGADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQ 142

  Fly   161 CKENVPSLCGCDHTERRGRIYLEINVKENLLTVQIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQ 225
            |..|||||||.||||:||||||:..|.:..|.|.:::.:||||||||||||||||:|||||.|::
Mouse   143 CVINVPSLCGMDHTEKRGRIYLKAEVTDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNE 207

  Fly   226 SKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRNDFMGALSFGISEIIKNPTN 290
            ||:||:||::.|||.|||:.|:.|||.|||||:.:|:||||||:||||||:||||:||::|.|.:
Mouse   208 SKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMPAS 272

  Fly   291 GWFKLLTQDEGEYYNVPCAD-DEQDLLKLKQK-------PSQKKPMVMRSDTNTHTSSKKDMIRA 347
            ||:|||.|:||||||||..: ||:..::|:||       |:..| ::..|:.....|:..|.::.
Mouse   273 GWYKLLNQEEGEYYNVPIPEGDEEGNMELRQKFEKAKLGPAGNK-VISPSEDRKQPSNNLDRVKL 336

  Fly   348 TDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVLALGEKPPFLV 412
            |||||:.||||||||||:||:|||:|||||||||||||:||||||||||:|||||||.:|||||.
Mouse   337 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 401

  Fly   413 QLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHTKGILYRDLKL 477
            ||||||||:|||:||||||||||||:.|||.||||||.||||||||:.||||||.:||:||||||
Mouse   402 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKL 466

  Fly   478 DNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEM 542
            |||:||::||:||||||||||:::...||:||||||||||||||.||||||||||||||||||||
Mouse   467 DNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 531

  Fly   543 LVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNKRLGCGSSGEEDVRLHPF 607
            |.||||||||||:|||.:|.:|||||||||||||...|||.:||.|.||||||..||.|||.|.|
Mouse   532 LAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAF 596

  Fly   608 FRRIDWEKIENREVQPPFKPKIKH---------------RKDVSNFDKQFTSEKTDLTPTDKVFM 657
            ||||||||:||||:|||||||:..               .|...||||.||..:..|||.|::.:
Mouse   597 FRRIDWEKLENREIQPPFKPKVTFCTKMHWLQWASRPSCGKGAENFDKFFTRGQPVLTPPDQLVI 661

  Fly   658 MNLDQSEFVGFSYMNPEYV 676
            .|:|||:|.||||:||::|
Mouse   662 ANIDQSDFEGFSYVNPQFV 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 49/65 (75%)
C1_cPKC_rpt2 120..173 CDD:410386 36/52 (69%)
C2_PKC_alpha_gamma 177..307 CDD:175992 85/129 (66%)
STKc_cPKC 353..672 CDD:270739 243/333 (73%)
PrkcaXP_036012317.1 C1_cPKC_rpt1 35..92 CDD:410383 49/65 (75%)
C1_cPKC_rpt2 102..155 CDD:410386 36/52 (69%)
C2_PKC_alpha_gamma 159..289 CDD:175992 85/129 (66%)
STKc_cPKC_alpha 328..684 CDD:270766 253/353 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839294
Domainoid 1 1.000 421 1.000 Domainoid score I636
eggNOG 1 0.900 - - E1_KOG0696
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55679
Inparanoid 1 1.050 954 1.000 Inparanoid score I337
Isobase 1 0.950 - 0 Normalized mean entropy S820
OMA 1 1.010 - - QHG51944
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 1 1.000 - - otm44268
orthoMCL 1 0.900 - - OOG6_103255
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

Return to query results.
Submit another query.