DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and Prkcd

DIOPT Version :9

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_579841.2 Gene:Prkcd / 170538 RGDID:67383 Length:673 Species:Rattus norvegicus


Alignment Length:685 Identity:287/685 - (41%)
Similarity:371/685 - (54%) Gaps:157/685 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NGD-PQQQGAEGEAVGENKMKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQS 71
            :|| .|...:|.||:    ..:..|:||:|:..:..:|:|.|||.||.||||||.||:|:     
  Rat   124 DGDCKQSMRSEEEAM----FPTMNRRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKEFV----- 179

  Fly    72 GYAWMGFGKQGFQCQVCSYVVHKRCHEYVTFICPG----------KDKGIDSDSPKTQHNFEPFT 126
               | |..|||::|:.|:..:||:|.:.:...|.|          :.:..:.|.|   |.|:.:.
  Rat   180 ---W-GLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTATNSRDTIFQKERFNIDMP---HRFKVYN 237

  Fly   127 YAGPTFCDHCGSLLYGIYHQGLKCSACDMNVHARCKENVPSLCGCDHTERRGRIYLEINVKENLL 191
            |..|||||||||||:|:..|||||..|.||||.:|:|.|.:|||               :.:.||
  Rat   238 YMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCG---------------INQKLL 287

  Fly   192 TVQIKEGRNLIPMDPNGLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDR 256
            .    |..|.:                             |.||...|...||:           
  Rat   288 A----EALNQV-----------------------------TQKASRKPETPETV----------- 308

  Fly   257 RILIEVWDWDRTSRNDFMGALSFGISEIIKNPTNGWFKLLTQDEGEYYNVPCADDEQDLLKLKQK 321
                                                        |.|...               
  Rat   309 --------------------------------------------GIYQGF--------------- 314

  Fly   322 PSQKKPMVMRSD--TNTHTSSK----KDMIRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKI 380
              :||..|..:|  .|..|..|    .:..|..:|.|.|||||||||||||||.||.|..:|||.
  Rat   315 --EKKTAVSGNDIPDNNGTYGKIWEGSNRCRLENFTFQKVLGKGSFGKVLLAELKGKERYFAIKY 377

  Fly   381 LKKDVIIQDDDVECTMIEKRVLALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGK 445
            |||||::.||||||||:|||||||..:.|||..|...|||.|.||||||::|||||||.||..|:
  Rat   378 LKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLICTFQTKDHLFFVMEFLNGGDLMFHIQDKGR 442

  Fly   446 FKEPVAVFYAAEIAAGLFFLHTKGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFC 510
            |:...|.||||||..||.|||.|||:|||||||||:||.|||:||||||||||||.|:....|||
  Rat   443 FELYRATFYAAEIICGLQFLHGKGIIYRDLKLDNVMLDKDGHIKIADFGMCKENIFGENRASTFC 507

  Fly   511 GTPDYIAPEIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPKSLSKE 575
            ||||||||||:....|..|||||::||||||||:||.||.|:||:|||.:|......||:.::||
  Rat   508 GTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKE 572

  Fly   576 AKEACKGFLTKQPNKRLGCGSSGEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDK 640
            :|:..:....:.|.||||...    ::||||||:.|:|..:|.|:|:||||||:|...|.||||.
  Rat   573 SKDIMEKLFERDPAKRLGVTG----NIRLHPFFKTINWNLLEKRKVEPPFKPKVKSPSDYSNFDP 633

  Fly   641 QFTSEKTDLTPTDKVFMMNLDQSEFVGFSYMNPEY 675
            :|.:||..|:.:||..:.::||:.|.|||::||:|
  Rat   634 EFLNEKPQLSFSDKNLIDSMDQTAFKGFSFVNPKY 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 28/75 (37%)
C1_cPKC_rpt2 120..173 CDD:410386 31/52 (60%)
C2_PKC_alpha_gamma 177..307 CDD:175992 12/129 (9%)
STKc_cPKC 353..672 CDD:270739 191/318 (60%)
PrkcdNP_579841.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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