DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkc53E and prkcdb

DIOPT Version :9

Sequence 1:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001352166.1 Gene:prkcdb / 100150844 ZFINID:ZDB-GENE-111129-1 Length:685 Species:Danio rerio


Alignment Length:662 Identity:275/662 - (41%)
Similarity:364/662 - (54%) Gaps:146/662 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICGYQSGYAWMGFGKQGFQCQVCSYVVHKR 95
            |:||:|:..|..:|:|.|.|.|||||||||.|::|:        | |..|||::|:.|:..:||:
Zfish   145 RRGAIKQAKVHFIKNHEFTATFFKQPTFCSVCREFV--------W-GLNKQGYKCRQCNAAIHKK 200

  Fly    96 CHEYVTFICPG----------KDKGIDSDSPKTQHNFEPFTYAGPTFCDHCGSLLYGIYHQGLKC 150
            |.:.:...|.|          :.:....|.|   |.|:...|..|||||||||||:|:..|||||
Zfish   201 CIDKIIGRCTGTATNSRDTMFQKERFKIDMP---HRFKTNNYMSPTFCDHCGSLLWGMVKQGLKC 262

  Fly   151 SACDMNVHARCKENVPSLCGCDH---TERRGRIYLEINVKE---NLLTVQIKEG--RNLIPMDPN 207
            ..|.||||.:|:..|.:|||.:.   .|...::.|:.:.|.   .|..:.|.:.  :| :|.||:
Zfish   263 EDCGMNVHHKCQTKVANLCGINQKLLAEALNQVSLKSSTKRPDPTLSEIGIYQAIDKN-VPADPS 326

  Fly   208 GLSDPYVKVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILIEVWDWDRTSRND 272
            .....|.|.                              :|:.|......|:..|    |.|.||
Zfish   327 AEGSQYGKF------------------------------WDITPAVPASTIVSTV----RVSLND 357

  Fly   273 FMGALSFGISEIIKNPTNGWFKLLTQDEGEYYNVPCADDEQDLLKLKQKPSQKKPMVMRSDTNTH 337
            |:                                                               
Zfish   358 FV--------------------------------------------------------------- 359

  Fly   338 TSSKKDMIRATDFNFIKVLGKGSFGKVLLAERKGSEELYAIKILKKDVIIQDDDVECTMIEKRVL 402
                          |.|||||||||||:|||.||..:.:|||.|||||::.||||||||:|||||
Zfish   360 --------------FQKVLGKGSFGKVMLAELKGKGQYFAIKALKKDVVLMDDDVECTMVEKRVL 410

  Fly   403 ALGEKPPFLVQLHSCFQTMDRLFFVMEYVNGGDLMFQIQQFGKFKEPVAVFYAAEIAAGLFFLHT 467
            ||..:.|||..|:..||:.:.|||||||:|||||||.||..|:|....|.||||||..||.:||:
Zfish   411 ALAWENPFLTHLYCTFQSKEHLFFVMEYLNGGDLMFHIQDKGRFDLYRATFYAAEIICGLQYLHS 475

  Fly   468 KGILYRDLKLDNVLLDADGHVKIADFGMCKENIVGDKTTKTFCGTPDYIAPEIILYQPYGKSVDW 532
            |||:|||||||||:||.|||:|||||||||||::|:....|||||||||||||:|.|.|..||||
Zfish   476 KGIVYRDLKLDNVMLDKDGHIKIADFGMCKENMIGENRATTFCGTPDYIAPEILLGQKYSFSVDW 540

  Fly   533 WAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPKSLSKEAKEACKGFLTKQPNKRLGCGSS 597
            |::||||||||:||.||.|:||:|||.:|......||:.::||||:..:....:.|.:|||... 
Zfish   541 WSFGVLLYEMLIGQSPFQGDDEDELFDSIRMDVPHYPRWITKEAKDLLEKLFERDPTRRLGVVG- 604

  Fly   598 GEEDVRLHPFFRRIDWEKIENREVQPPFKPKIKHRKDVSNFDKQFTSEKTDLTPTDKVFMMNLDQ 662
               ::|.|.||:.|:|..:|.|||.||||||:|...|.||||::|.|||..|:.:||..:.::||
Zfish   605 ---NIRGHAFFKTINWPALEKREVSPPFKPKVKSSSDCSNFDREFLSEKPRLSQSDKNLIDSMDQ 666

  Fly   663 SEFVGFSYMNPE 674
            :.|.|||::||:
Zfish   667 TAFAGFSFINPK 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 27/75 (36%)
C1_cPKC_rpt2 120..173 CDD:410386 30/52 (58%)
C2_PKC_alpha_gamma 177..307 CDD:175992 19/134 (14%)
STKc_cPKC 353..672 CDD:270739 188/318 (59%)
prkcdbNP_001352166.1 C1_1 160..209 CDD:278556 24/57 (42%)
C1_1 232..284 CDD:278556 30/51 (59%)
PKc_like 362..677 CDD:328722 188/318 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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