DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus101 and SLF1

DIOPT Version :10

Sequence 1:NP_524909.1 Gene:mus101 / 48309 FlyBaseID:FBgn0002878 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_115666.2 Gene:SLF1 / 84250 HGNCID:25408 Length:1058 Species:Homo sapiens


Alignment Length:232 Identity:72/232 - (31%)
Similarity:107/232 - (46%) Gaps:40/232 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1198 GSPK--MQYAGIPCFSISCGDDDEKRAELIARI--TQLGGKVCENLVNYDDSCTHLLCERPNRGE 1258
            |:||  :|..|...      ::.|...:|:.::  |.:..:..:|       ||||:.||..:.|
Human     4 GTPKHIIQMTGFKM------EEKEALVKLLLKLDCTFIKSEKYKN-------CTHLIAERLCKSE 55

  Fly  1259 KMLACIAAGKWILNIQYIEQSHARGDFLDETLYEWGNPKAINLPTLAPEEEPIAAAVHRWRTELS 1323
            |.||..|||||||...||..|...|.:||||.||||. |.......:|:   :.:|..|||.||.
Human    56 KFLAACAAGKWILTKDYIIHSAKSGRWLDETTYEWGY-KIEKDSRYSPQ---MQSAPKRWREELK 116

  Fly  1324 ACGG-GAFSDHRVILSM--NERSGAPIRNVLRAGGACILEP-TTPFSKDPVAKSASHCFVDVK-- 1382
            ..|. |||...:|:|.:  ::||.:.|| ||.||.|.::.| ::|.....|..|.:....:.:  
Human   117 RTGAPGAFHRWKVVLLVRTDKRSDSLIR-VLEAGKANVILPKSSPSGITHVIASNARIKAEKEKD 180

  Fly  1383 --KAPLSTQDMEYLHKCGVQVLSQIAINAYLMNGRDA 1417
              |||...          :|.|....:...:.|..|:
Human   181 NFKAPFYP----------IQYLGDFLLEKEIQNDEDS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus101NP_524909.1 BRCT 127..189 CDD:349339
BRCT_TopBP1_rpt2_like 216..294 CDD:349363
BRCT_TopBP1_rpt3 392..476 CDD:349350
BRCT 707..786 CDD:469589
BRCT_TopBP1_rpt7 1208..1283 CDD:349370 24/76 (32%)
BRCT 1334..1414 CDD:469589 20/86 (23%)
SLF1NP_115666.2 BRCT_SLF1 5..85 CDD:349381 30/92 (33%)
BRCT 127..198 CDD:469589 20/81 (25%)
NSE5-like domain, mediates interaction with SLF2. /evidence=ECO:0000269|PubMed:36373674 410..1058
ANKYR <796..>916 CDD:440430
ANK repeat 807..838 CDD:293786
ANK repeat 840..871 CDD:293786
ANK repeat 874..904 CDD:293786
Blue background indicates that the domain is not in the aligned region.

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